Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094650
Identifier: 20094650
GI number: 20094650
Start: 1203418
End: 1204770
Strand: Direct
Name: 20094650
Synonym: MK1214
Alternate gene names: NA
Gene position: 1203418-1204770 (Clockwise)
Preceding gene: 20094649
Following gene: 20094651
Centisome position: 71.0
GC content: 68.74
Gene sequence:
>1353_bases ATGTCCAGTCTGGACGTGGAGGAGGTCATCGAAACCATCGAGATGATCCGGATGCGGAACCTCGACGTCCGCGCGGTGAC GCTGGGGATCAACCTCCTGGACCGCGCTCACCCGGATCCGGAGGAGCTGGCGCGGGACGTCCGCGAGAAGATCGTCGAGG TCGCCGGTGACCTCGTGGAGGTCGTGGAGGAGGTGGAGGACGAGCTCGGAGTGCCGATCGTGAACAAGCGGATCGCCGTC ACACCGTGCTCCATCGTGGCCGCGTCCGCCGTCCGGAAGGAGGGACGCGAGGCCGTCCTGACCCTCGCGGAGGCGTTGGA CGAGGCGGCGGAGGAGGTCGGCGTCGACTACCTCGGCGGGTACACGGCTCTCGTCTACGACGGGTTCACGGAGGCGGACG AGGCCGTACTGGACACGATCCCGGAGGCCATCGAGGGGACGGAGCGGCTCTGCGCGTCGGTCGTGGTCGCGGACGAGCGC TACGGGATCAACATGGACGCGGTGTACAGGACCGCGGAGGCCGTCAAGGAGACCGCGGAACGTACCGATGGACACGGTTG TGCCAGACTCGTGGCGCTGACCAACGCCCCCGAGAACACGCCGTTCATGGCTGGGGCGTTCCACGGGGTCGGACAGCCCG AGGCGTGCGTCAACGTGGGGATCTCGGGACCGGGTGTCGTCCGGGCCGTCGTCGAGGAGCTGAAGGACGTCGACTTCCGG ACGCTGCACGACGAGATCAAGCGGACCGCGTTCAAGATCACCCGGGTCGGCGAGCTGGTGGGCCGGCGGGTGGCGGAGCG CCTCGGGGTGGAGTTCGGGGCCGTGGACCTGTCGCTGGCTCCGACCCCCGAGGAGGGCGACAGCGTCGCGGAGATCCTGG AGGGGATCGGCCTCGAGTCGTGCGGTTGTCCCGGGAGCACGGCCGCGCTGCACCTACTGATGGACGCTGTCAAGAAGGGT GGAGCGGCCGCGACCTCGAGACACGGCGGTTACAGCGAGGCGTTCATCCCGGTGAGCGAGGACGCCGGGATGGCCCGCGC GGCGGAGGAGGCCCTCACCCTCGAGAAGCTCGAGGCCATGACCGCGGTGTGCTCCGTGGGGATCGACATGGTAGTCGTAC CCGGCGACACCCCGGTCGAGACCATCGCCGGTATCATCGCGGACGAGGCGGCGATCGGCGTGGTCACGGGCAAGCCGACG GCAGTCAGGATCATCCCGGCGCCGGGCAAGGAGCCCGGGGACGAGTTCGAGATGGGCGGACTGCTCGGCCGGGCACCGGT CATGGACGTCTCGGACTACCGACCTACCATGTTCCGCAGGGACGGTCGGATACCGCCTAAGTTCCCACGATAA
Upstream 100 bases:
>100_bases AGCTGAGGGAGGAGCTCCAAAAGGCCGGCGAAGAGCTCGGTGTCGACGTGATCGTTCAGCATGAAGACGTGTACCGCGCG ATGCACCGGGTGTAGGTCCC
Downstream 100 bases:
>100_bases CGGCCGATGACGAGCCTGCCCCGGCGGGATCGGTGACGAGGATTGGCCTTTCCGAGGCCCGACGGGGGTGAACGCGTCGC CGACCGTCGTGGTAATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVEVVEEVEDELGVPIVNKRIAV TPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGGYTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADER YGINMDAVYRTAEAVKETAERTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLESCGCPGSTAALHLLMDAVKKG GAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAMTAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPT AVRIIPAPGKEPGDEFEMGGLLGRAPVMDVSDYRPTMFRRDGRIPPKFPR
Sequences:
>Translated_450_residues MSSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVEVVEEVEDELGVPIVNKRIAV TPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGGYTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADER YGINMDAVYRTAEAVKETAERTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLESCGCPGSTAALHLLMDAVKKG GAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAMTAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPT AVRIIPAPGKEPGDEFEMGGLLGRAPVMDVSDYRPTMFRRDGRIPPKFPR >Mature_449_residues SSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVEVVEEVEDELGVPIVNKRIAVT PCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGGYTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADERY GINMDAVYRTAEAVKETAERTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFRT LHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLESCGCPGSTAALHLLMDAVKKGG AAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAMTAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPTA VRIIPAPGKEPGDEFEMGGLLGRAPVMDVSDYRPTMFRRDGRIPPKFPR
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1214_METKA (Q8TW23)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614497.1 - ProteinModelPortal: Q8TW23 - GeneID: 1477809 - GenomeReviews: AE009439_GR - KEGG: mka:MK1214 - NMPDR: fig|190192.1.peg.1210 - HOGENOM: HBG296656 - OMA: CGTHGTT - ProtClustDB: PRK05313 - BioCyc: MKAN190192:MK1214-MONOMER - HAMAP: MF_01221 - InterPro: IPR007841
Pfam domain/function: PF05167 DUF711
EC number: NA
Molecular weight: Translated: 47698; Mature: 47567
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVE CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VVEEVEDELGVPIVNKRIAVTPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGG HHHHHHHHCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC YTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADERYGINMDAVYRTAEAVKETAE EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH RTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR HCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHEECCCCCCHHHHHHHHHHHCCHHH TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCCCCHHHHHHHHCCCCCC CGCPGSTAALHLLMDAVKKGGAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAM CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH TAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPTAVRIIPAPGKEPGDEFEMGG HHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCHHHHCC LLGRAPVMDVSDYRPTMFRRDGRIPPKFPR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure SSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVE CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VVEEVEDELGVPIVNKRIAVTPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGG HHHHHHHHCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC YTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADERYGINMDAVYRTAEAVKETAE EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH RTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR HCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHEECCCCCCHHHHHHHHHHHCCHHH TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCCCCHHHHHHHHCCCCCC CGCPGSTAALHLLMDAVKKGGAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAM CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH TAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPTAVRIIPAPGKEPGDEFEMGG HHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCHHHHCC LLGRAPVMDVSDYRPTMFRRDGRIPPKFPR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014