Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094650

Identifier: 20094650

GI number: 20094650

Start: 1203418

End: 1204770

Strand: Direct

Name: 20094650

Synonym: MK1214

Alternate gene names: NA

Gene position: 1203418-1204770 (Clockwise)

Preceding gene: 20094649

Following gene: 20094651

Centisome position: 71.0

GC content: 68.74

Gene sequence:

>1353_bases
ATGTCCAGTCTGGACGTGGAGGAGGTCATCGAAACCATCGAGATGATCCGGATGCGGAACCTCGACGTCCGCGCGGTGAC
GCTGGGGATCAACCTCCTGGACCGCGCTCACCCGGATCCGGAGGAGCTGGCGCGGGACGTCCGCGAGAAGATCGTCGAGG
TCGCCGGTGACCTCGTGGAGGTCGTGGAGGAGGTGGAGGACGAGCTCGGAGTGCCGATCGTGAACAAGCGGATCGCCGTC
ACACCGTGCTCCATCGTGGCCGCGTCCGCCGTCCGGAAGGAGGGACGCGAGGCCGTCCTGACCCTCGCGGAGGCGTTGGA
CGAGGCGGCGGAGGAGGTCGGCGTCGACTACCTCGGCGGGTACACGGCTCTCGTCTACGACGGGTTCACGGAGGCGGACG
AGGCCGTACTGGACACGATCCCGGAGGCCATCGAGGGGACGGAGCGGCTCTGCGCGTCGGTCGTGGTCGCGGACGAGCGC
TACGGGATCAACATGGACGCGGTGTACAGGACCGCGGAGGCCGTCAAGGAGACCGCGGAACGTACCGATGGACACGGTTG
TGCCAGACTCGTGGCGCTGACCAACGCCCCCGAGAACACGCCGTTCATGGCTGGGGCGTTCCACGGGGTCGGACAGCCCG
AGGCGTGCGTCAACGTGGGGATCTCGGGACCGGGTGTCGTCCGGGCCGTCGTCGAGGAGCTGAAGGACGTCGACTTCCGG
ACGCTGCACGACGAGATCAAGCGGACCGCGTTCAAGATCACCCGGGTCGGCGAGCTGGTGGGCCGGCGGGTGGCGGAGCG
CCTCGGGGTGGAGTTCGGGGCCGTGGACCTGTCGCTGGCTCCGACCCCCGAGGAGGGCGACAGCGTCGCGGAGATCCTGG
AGGGGATCGGCCTCGAGTCGTGCGGTTGTCCCGGGAGCACGGCCGCGCTGCACCTACTGATGGACGCTGTCAAGAAGGGT
GGAGCGGCCGCGACCTCGAGACACGGCGGTTACAGCGAGGCGTTCATCCCGGTGAGCGAGGACGCCGGGATGGCCCGCGC
GGCGGAGGAGGCCCTCACCCTCGAGAAGCTCGAGGCCATGACCGCGGTGTGCTCCGTGGGGATCGACATGGTAGTCGTAC
CCGGCGACACCCCGGTCGAGACCATCGCCGGTATCATCGCGGACGAGGCGGCGATCGGCGTGGTCACGGGCAAGCCGACG
GCAGTCAGGATCATCCCGGCGCCGGGCAAGGAGCCCGGGGACGAGTTCGAGATGGGCGGACTGCTCGGCCGGGCACCGGT
CATGGACGTCTCGGACTACCGACCTACCATGTTCCGCAGGGACGGTCGGATACCGCCTAAGTTCCCACGATAA

Upstream 100 bases:

>100_bases
AGCTGAGGGAGGAGCTCCAAAAGGCCGGCGAAGAGCTCGGTGTCGACGTGATCGTTCAGCATGAAGACGTGTACCGCGCG
ATGCACCGGGTGTAGGTCCC

Downstream 100 bases:

>100_bases
CGGCCGATGACGAGCCTGCCCCGGCGGGATCGGTGACGAGGATTGGCCTTTCCGAGGCCCGACGGGGGTGAACGCGTCGC
CGACCGTCGTGGTAATCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVEVVEEVEDELGVPIVNKRIAV
TPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGGYTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADER
YGINMDAVYRTAEAVKETAERTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR
TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLESCGCPGSTAALHLLMDAVKKG
GAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAMTAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPT
AVRIIPAPGKEPGDEFEMGGLLGRAPVMDVSDYRPTMFRRDGRIPPKFPR

Sequences:

>Translated_450_residues
MSSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVEVVEEVEDELGVPIVNKRIAV
TPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGGYTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADER
YGINMDAVYRTAEAVKETAERTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR
TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLESCGCPGSTAALHLLMDAVKKG
GAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAMTAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPT
AVRIIPAPGKEPGDEFEMGGLLGRAPVMDVSDYRPTMFRRDGRIPPKFPR
>Mature_449_residues
SSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVEVVEEVEDELGVPIVNKRIAVT
PCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGGYTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADERY
GINMDAVYRTAEAVKETAERTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFRT
LHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLESCGCPGSTAALHLLMDAVKKGG
AAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAMTAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPTA
VRIIPAPGKEPGDEFEMGGLLGRAPVMDVSDYRPTMFRRDGRIPPKFPR

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1214_METKA (Q8TW23)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614497.1
- ProteinModelPortal:   Q8TW23
- GeneID:   1477809
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1214
- NMPDR:   fig|190192.1.peg.1210
- HOGENOM:   HBG296656
- OMA:   CGTHGTT
- ProtClustDB:   PRK05313
- BioCyc:   MKAN190192:MK1214-MONOMER
- HAMAP:   MF_01221
- InterPro:   IPR007841

Pfam domain/function: PF05167 DUF711

EC number: NA

Molecular weight: Translated: 47698; Mature: 47567

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVE
CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VVEEVEDELGVPIVNKRIAVTPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGG
HHHHHHHHCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
YTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADERYGINMDAVYRTAEAVKETAE
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH
RTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR
HCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHEECCCCCCHHHHHHHHHHHCCHHH
TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCCCCHHHHHHHHCCCCCC
CGCPGSTAALHLLMDAVKKGGAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAM
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
TAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPTAVRIIPAPGKEPGDEFEMGG
HHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCHHHHCC
LLGRAPVMDVSDYRPTMFRRDGRIPPKFPR
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSLDVEEVIETIEMIRMRNLDVRAVTLGINLLDRAHPDPEELARDVREKIVEVAGDLVE
CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VVEEVEDELGVPIVNKRIAVTPCSIVAASAVRKEGREAVLTLAEALDEAAEEVGVDYLGG
HHHHHHHHCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
YTALVYDGFTEADEAVLDTIPEAIEGTERLCASVVVADERYGINMDAVYRTAEAVKETAE
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH
RTDGHGCARLVALTNAPENTPFMAGAFHGVGQPEACVNVGISGPGVVRAVVEELKDVDFR
HCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHEECCCCCCHHHHHHHHHHHCCHHH
TLHDEIKRTAFKITRVGELVGRRVAERLGVEFGAVDLSLAPTPEEGDSVAEILEGIGLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCCCCHHHHHHHHCCCCCC
CGCPGSTAALHLLMDAVKKGGAAATSRHGGYSEAFIPVSEDAGMARAAEEALTLEKLEAM
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
TAVCSVGIDMVVVPGDTPVETIAGIIADEAAIGVVTGKPTAVRIIPAPGKEPGDEFEMGG
HHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCHHHHCC
LLGRAPVMDVSDYRPTMFRRDGRIPPKFPR
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014