Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094649
Identifier: 20094649
GI number: 20094649
Start: 1203140
End: 1203412
Strand: Direct
Name: 20094649
Synonym: MK1213
Alternate gene names: NA
Gene position: 1203140-1203412 (Clockwise)
Preceding gene: 20094636
Following gene: 20094650
Centisome position: 70.98
GC content: 62.64
Gene sequence:
>273_bases TTGACCCGCGCGGTGGTGACCGTGATCGGTGCGGATCGACCCGGTATCGTCGCCGGAATCTCGAGCGTCCTGGCCGAACA TAACGCGAACATCGAGGACATCTCCCAGACGGTACTGCGCGACCTGTTCGCGATGGTCATGCTCGTCGACCTCTCCGAGG CCGACGTGAGCGTGGGTAAGCTGAGGGAGGAGCTCCAAAAGGCCGGCGAAGAGCTCGGTGTCGACGTGATCGTTCAGCAT GAAGACGTGTACCGCGCGATGCACCGGGTGTAG
Upstream 100 bases:
>100_bases CGTTCGACGTCGAAGCCCGCGTCTGCACTCCGTCCCGGTCCTCGGGCCCTTCGCGGAAAACCTTTCCGACGGTCGCGATC ACGCTCCTGGGGGCATCGGG
Downstream 100 bases:
>100_bases GTCCCATGTCCAGTCTGGACGTGGAGGAGGTCATCGAAACCATCGAGATGATCCGGATGCGGAACCTCGACGTCCGCGCG GTGACGCTGGGGATCAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTRAVVTVIGADRPGIVAGISSVLAEHNANIEDISQTVLRDLFAMVMLVDLSEADVSVGKLREELQKAGEELGVDVIVQH EDVYRAMHRV
Sequences:
>Translated_90_residues MTRAVVTVIGADRPGIVAGISSVLAEHNANIEDISQTVLRDLFAMVMLVDLSEADVSVGKLREELQKAGEELGVDVIVQH EDVYRAMHRV >Mature_89_residues TRAVVTVIGADRPGIVAGISSVLAEHNANIEDISQTVLRDLFAMVMLVDLSEADVSVGKLREELQKAGEELGVDVIVQHE DVYRAMHRV
Specific function: Unknown
COG id: COG3830
COG function: function code T; ACT domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1213_METKA (Q8TW24)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614496.1 - ProteinModelPortal: Q8TW24 - SMR: Q8TW24 - GeneID: 1477808 - GenomeReviews: AE009439_GR - KEGG: mka:MK1213 - NMPDR: fig|190192.1.peg.1209 - HOGENOM: HBG305002 - OMA: FTMIMLV - ProtClustDB: PRK00194 - BioCyc: MKAN190192:MK1213-MONOMER - HAMAP: MF_01054 - InterPro: IPR002912 - InterPro: IPR022986
Pfam domain/function: PF01842 ACT
EC number: NA
Molecular weight: Translated: 9798; Mature: 9667
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAVVTVIGADRPGIVAGISSVLAEHNANIEDISQTVLRDLFAMVMLVDLSEADVSVGK CCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LREELQKAGEELGVDVIVQHEDVYRAMHRV HHHHHHHHHHHCCCCEEECHHHHHHHHHCC >Mature Secondary Structure TRAVVTVIGADRPGIVAGISSVLAEHNANIEDISQTVLRDLFAMVMLVDLSEADVSVGK CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LREELQKAGEELGVDVIVQHEDVYRAMHRV HHHHHHHHHHHCCCCEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014