| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is CrcB
Identifier: 20094647
GI number: 20094647
Start: 1201704
End: 1202099
Strand: Reverse
Name: CrcB
Synonym: MK1211
Alternate gene names: 20094647
Gene position: 1202099-1201704 (Counterclockwise)
Preceding gene: 20094648
Following gene: 20094646
Centisome position: 70.92
GC content: 68.18
Gene sequence:
>396_bases GTGGTGAAGATCGGGGCCCGGGAGCTGGCCGCCGTGGCGATCGGAGGCGCGCTGGGGGCGGTCTGTCGCTACTTACTGTC CGGTCTCGTACCGCAGGTGCGCGGGTTCCCGATGGGGACGGTCCTCGTGAACGTCCTCGGGTCGTTCGTCCTAGGGTTCC TCACCTGGTCGACGATGCTCGGCCTGCGGCTCTCCCCAGAGGTCCGCGCGCTCGCGACGGTGGGGTTCTGCGGGGGCCTC ACCACGCTGAGCACGATGGCGTACGAGACCGTGGAGCTGTTGAAGGCCTCGCCGGTACTCTCCATTCTTTACTTAACAGC TAACGTCGTGCTCGGGATCGCGGCCGTGCTCGGCGGCATGGCGGCGGCGCACGTGGTATGGTCGGGGAGGGCGTGA
Upstream 100 bases:
>100_bases GCTGCGGGTGGCGAGACGTCTCGACTTCTCGAAAGTGTGTCTGCTGTTGGGTGGGATCGCGCTCCTCGTGCCGCTCGCAG CCAAGATGCTCTGAGGAGGG
Downstream 100 bases:
>100_bases GGTTGGTCAGGAAGATCGAAGAACCGGTGAAACTGAAGGTGTACCTGTTGGAAGGAGACAAGGTCGATGGGGTGCCCGCG GTGGACTGGATCCTCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTMLGLRLSPEVRALATVGFCGGL TTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGMAAAHVVWSGRA
Sequences:
>Translated_131_residues MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTMLGLRLSPEVRALATVGFCGGL TTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGMAAAHVVWSGRA >Mature_131_residues MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTMLGLRLSPEVRALATVGFCGGL TTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGMAAAHVVWSGRA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=89, Percent_Identity=42.6966292134831, Blast_Score=63, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_METKA (Q8TW26)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614494.1 - GeneID: 1477806 - GenomeReviews: AE009439_GR - KEGG: mka:MK1211 - NMPDR: fig|190192.1.peg.1207 - HOGENOM: HBG753179 - OMA: LASMFFW - BioCyc: MKAN190192:MK1211-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13434; Mature: 13434
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe20c4f4)-; HASH(0xc28cd98)-; HASH(0xdbd966c)-; HASH(0xd378710)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTML CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GLRLSPEVRALATVGFCGGLTTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AAAHVVWSGRA HHHHHHCCCCH >Mature Secondary Structure MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTML CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GLRLSPEVRALATVGFCGGLTTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AAAHVVWSGRA HHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11930014