Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is CrcB

Identifier: 20094647

GI number: 20094647

Start: 1201704

End: 1202099

Strand: Reverse

Name: CrcB

Synonym: MK1211

Alternate gene names: 20094647

Gene position: 1202099-1201704 (Counterclockwise)

Preceding gene: 20094648

Following gene: 20094646

Centisome position: 70.92

GC content: 68.18

Gene sequence:

>396_bases
GTGGTGAAGATCGGGGCCCGGGAGCTGGCCGCCGTGGCGATCGGAGGCGCGCTGGGGGCGGTCTGTCGCTACTTACTGTC
CGGTCTCGTACCGCAGGTGCGCGGGTTCCCGATGGGGACGGTCCTCGTGAACGTCCTCGGGTCGTTCGTCCTAGGGTTCC
TCACCTGGTCGACGATGCTCGGCCTGCGGCTCTCCCCAGAGGTCCGCGCGCTCGCGACGGTGGGGTTCTGCGGGGGCCTC
ACCACGCTGAGCACGATGGCGTACGAGACCGTGGAGCTGTTGAAGGCCTCGCCGGTACTCTCCATTCTTTACTTAACAGC
TAACGTCGTGCTCGGGATCGCGGCCGTGCTCGGCGGCATGGCGGCGGCGCACGTGGTATGGTCGGGGAGGGCGTGA

Upstream 100 bases:

>100_bases
GCTGCGGGTGGCGAGACGTCTCGACTTCTCGAAAGTGTGTCTGCTGTTGGGTGGGATCGCGCTCCTCGTGCCGCTCGCAG
CCAAGATGCTCTGAGGAGGG

Downstream 100 bases:

>100_bases
GGTTGGTCAGGAAGATCGAAGAACCGGTGAAACTGAAGGTGTACCTGTTGGAAGGAGACAAGGTCGATGGGGTGCCCGCG
GTGGACTGGATCCTCGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTMLGLRLSPEVRALATVGFCGGL
TTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGMAAAHVVWSGRA

Sequences:

>Translated_131_residues
MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTMLGLRLSPEVRALATVGFCGGL
TTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGMAAAHVVWSGRA
>Mature_131_residues
MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTMLGLRLSPEVRALATVGFCGGL
TTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGMAAAHVVWSGRA

Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family

Homologues:

Organism=Escherichia coli, GI1786842, Length=89, Percent_Identity=42.6966292134831, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CRCB_METKA (Q8TW26)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614494.1
- GeneID:   1477806
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1211
- NMPDR:   fig|190192.1.peg.1207
- HOGENOM:   HBG753179
- OMA:   LASMFFW
- BioCyc:   MKAN190192:MK1211-MONOMER
- HAMAP:   MF_00454
- InterPro:   IPR003691
- TIGRFAMs:   TIGR00494

Pfam domain/function: PF02537 CRCB

EC number: NA

Molecular weight: Translated: 13434; Mature: 13434

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe20c4f4)-; HASH(0xc28cd98)-; HASH(0xdbd966c)-; HASH(0xd378710)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLRLSPEVRALATVGFCGGLTTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AAAHVVWSGRA
HHHHHHCCCCH
>Mature Secondary Structure
MVKIGARELAAVAIGGALGAVCRYLLSGLVPQVRGFPMGTVLVNVLGSFVLGFLTWSTML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLRLSPEVRALATVGFCGGLTTLSTMAYETVELLKASPVLSILYLTANVVLGIAAVLGGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AAAHVVWSGRA
HHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11930014