| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094646
Identifier: 20094646
GI number: 20094646
Start: 1201369
End: 1201722
Strand: Reverse
Name: 20094646
Synonym: MK1210
Alternate gene names: NA
Gene position: 1201722-1201369 (Counterclockwise)
Preceding gene: 20094647
Following gene: 20094645
Centisome position: 70.9
GC content: 65.82
Gene sequence:
>354_bases ATGGTCGGGGAGGGCGTGAGGTTGGTCAGGAAGATCGAAGAACCGGTGAAACTGAAGGTGTACCTGTTGGAAGGAGACAA GGTCGATGGGGTGCCCGCGGTGGACTGGATCCTCGAACGCGTGCGCGAGCTCGGACTGAGAGGGGCCACCGTGCACCGCT GCTTCGCGGGCTGCGGCCGCCGCGGGCGCTCGGAGGCGCGCATCCTCAGGACGTCGATGAACCTGCCCGTGGTCGTCGAG GTGGTGGACAGTCGGGAGAAGGTCGAGCGCCTGCTGGAGCTCCTCAAAGAGCGTCTCGGCGTGGGCGTCGTAACCCTGGA GCGGTTAGAGGTCGCGTACGACTTGGAGGGGTGA
Upstream 100 bases:
>100_bases TGTTGAAGGCCTCGCCGGTACTCTCCATTCTTTACTTAACAGCTAACGTCGTGCTCGGGATCGCGGCCGTGCTCGGCGGC ATGGCGGCGGCGCACGTGGT
Downstream 100 bases:
>100_bases GCACGTGCAGAGTCCGTACGTACGTGAAGCCGTTAGGGAGATGGACCTCCCGGACGAGGTGATCGTCTACGACACGACGC TGAGGGACGGTGAGCAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MVGEGVRLVRKIEEPVKLKVYLLEGDKVDGVPAVDWILERVRELGLRGATVHRCFAGCGRRGRSEARILRTSMNLPVVVE VVDSREKVERLLELLKERLGVGVVTLERLEVAYDLEG
Sequences:
>Translated_117_residues MVGEGVRLVRKIEEPVKLKVYLLEGDKVDGVPAVDWILERVRELGLRGATVHRCFAGCGRRGRSEARILRTSMNLPVVVE VVDSREKVERLLELLKERLGVGVVTLERLEVAYDLEG >Mature_117_residues MVGEGVRLVRKIEEPVKLKVYLLEGDKVDGVPAVDWILERVRELGLRGATVHRCFAGCGRRGRSEARILRTSMNLPVVVE VVDSREKVERLLELLKERLGVGVVTLERLEVAYDLEG
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 13164; Mature: 13164
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGEGVRLVRKIEEPVKLKVYLLEGDKVDGVPAVDWILERVRELGLRGATVHRCFAGCGR CCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC RGRSEARILRTSMNLPVVVEVVDSREKVERLLELLKERLGVGVVTLERLEVAYDLEG CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCC >Mature Secondary Structure MVGEGVRLVRKIEEPVKLKVYLLEGDKVDGVPAVDWILERVRELGLRGATVHRCFAGCGR CCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC RGRSEARILRTSMNLPVVVEVVDSREKVERLLELLKERLGVGVVTLERLEVAYDLEG CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]