| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094611
Identifier: 20094611
GI number: 20094611
Start: 1167028
End: 1167396
Strand: Reverse
Name: 20094611
Synonym: MK1175
Alternate gene names: NA
Gene position: 1167396-1167028 (Counterclockwise)
Preceding gene: 20094612
Following gene: 20094607
Centisome position: 68.87
GC content: 62.06
Gene sequence:
>369_bases ATGAGCGTAATCTCCAAGGATCCGGGCACGATCACCGTGGTCGTGAGGGTCGACGATGAGGCTCTTTCCAAGGCGTACAG CGCCGATAAGGGCGCGCGGATCACGGACTGGTTCGGACCCGTAGAGCTGTCACCTGGATCCCACGATGTCGGGATTCACC TCTATCTGGACGGCCAGGAGGTGAGGTGGTACGGGTCCGTGGTGAAGGTGATGAGCGGGCGAGAGCACGTCCGTGATCAC GACGAGTACGAGCATCACCGAGAGGAACACGATCACGGGGGAACAACGCGCATCAACCCCCGGAGGAGCGACTTTCCACC GTCCGGGAGTCGCTCAAGGGGCCCGAGGGATCATCCCAACTCCCGGTGA
Upstream 100 bases:
>100_bases AGGGGGACTGGAAGCCGGAAACTGGTACCTGGTCCGAGACGGCGAGATCCGACCCGAGGTCGAGCTTCCCTAAGAGGCCG CCAATGAGCTCTACGTGTAC
Downstream 100 bases:
>100_bases CTCCGGTTCAAGCGTCCGAGACTGTTGCCGAGACCTCCACCGAGCTCACTCCGGGAGAGGGCGGGCTCATCTCGAAAGGC GCTCACCACGTACGACACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSVISKDPGTITVVVRVDDEALSKAYSADKGARITDWFGPVELSPGSHDVGIHLYLDGQEVRWYGSVVKVMSGREHVRDH DEYEHHREEHDHGGTTRINPRRSDFPPSGSRSRGPRDHPNSR
Sequences:
>Translated_122_residues MSVISKDPGTITVVVRVDDEALSKAYSADKGARITDWFGPVELSPGSHDVGIHLYLDGQEVRWYGSVVKVMSGREHVRDH DEYEHHREEHDHGGTTRINPRRSDFPPSGSRSRGPRDHPNSR >Mature_121_residues SVISKDPGTITVVVRVDDEALSKAYSADKGARITDWFGPVELSPGSHDVGIHLYLDGQEVRWYGSVVKVMSGREHVRDHD EYEHHREEHDHGGTTRINPRRSDFPPSGSRSRGPRDHPNSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13739; Mature: 13608
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVISKDPGTITVVVRVDDEALSKAYSADKGARITDWFGPVELSPGSHDVGIHLYLDGQE CCCCCCCCCEEEEEEEECHHHHHHHHCCCCCCEEECCCCCEEECCCCCCEEEEEEECCCE VRWYGSVVKVMSGREHVRDHDEYEHHREEHDHGGTTRINPRRSDFPPSGSRSRGPRDHPN EEHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC SR CC >Mature Secondary Structure SVISKDPGTITVVVRVDDEALSKAYSADKGARITDWFGPVELSPGSHDVGIHLYLDGQE CCCCCCCCEEEEEEEECHHHHHHHHCCCCCCEEECCCCCEEECCCCCCEEEEEEECCCE VRWYGSVVKVMSGREHVRDHDEYEHHREEHDHGGTTRINPRRSDFPPSGSRSRGPRDHPN EEHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC SR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA