Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094607

Identifier: 20094607

GI number: 20094607

Start: 1161703

End: 1162374

Strand: Reverse

Name: 20094607

Synonym: MK1171

Alternate gene names: NA

Gene position: 1162374-1161703 (Counterclockwise)

Preceding gene: 20094611

Following gene: 20094606

Centisome position: 68.58

GC content: 63.24

Gene sequence:

>672_bases
ATGGAGACTTCAAGGGTGAGGTTCTTGCGTTATCGGACTCACCTCCTGCTCACCTACGTGATCGTCGCATACCTCTGGGA
TCCGAAGCACGCGCTCGCAGCCGCTCTCGGGAGCCTGCTGCCCGATCTCGATCATCCCAGCTCCGTGGCTTCCCGAGCCC
TCGTACCCCTTGAGAAAGCCACACTGTTACCGCTTCGTCGCCTGATCAACACGGTCGTCGGACACCGCGGGATCCTACAC
TGGCCCGTACCATGGGCGCTCGGAGCCTTTCTCGCTTGGTGGGTCGGACACACGGGTCTAGCCGCGGTCCTCCTGGGCGG
GTGCTTGCACTGTTTGGAAGACGCGCTCACGGTGCGCGGGGTCCCGCTCCTGGTCCGTCGGGACGGTGGTAGATGGAGGG
TATGGAACCTGAGACTAACACCCGTCCCCTCGGACAAGTGGGACGCGGTGCTACCGCCGGCGACGGTACTTCTCCTGTGC
CTCGTGATCCTAGCATGCCCGAGCGAGTTCCACACGCTGGGACTGGACCGTATCCCGGGGCTCGAGAAGGTGTACTGGAC
GATCCATGAGCGTGTGTACCATCGGCTCCTACATCCGTTCGACGCGTACGTGGGTACGTTCGCCCGCGAGATCCTCCGAC
TGGAACCGATGGCGGCTTTCGCGCCGTGCTAA

Upstream 100 bases:

>100_bases
GCCCACTCCGGGACTGGGGGTCGTCACGCCGGAGTGTCCCGGAGTTAACGTTAACGACGTCGGCTCCCGAGGGCCGGCGT
CGAAACGCCCCCGAGACGCG

Downstream 100 bases:

>100_bases
TCCGAGGTCCGGACGGAACGGGGTTCGAGCGTACGGGACCGGTCCGGGCGAGGATGGGTTCGTGGCGCTCTGGAGGGTGT
CGTTTGGAGGGGACGGTGTA

Product: membrane-bound metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
METSRVRFLRYRTHLLLTYVIVAYLWDPKHALAAALGSLLPDLDHPSSVASRALVPLEKATLLPLRRLINTVVGHRGILH
WPVPWALGAFLAWWVGHTGLAAVLLGGCLHCLEDALTVRGVPLLVRRDGGRWRVWNLRLTPVPSDKWDAVLPPATVLLLC
LVILACPSEFHTLGLDRIPGLEKVYWTIHERVYHRLLHPFDAYVGTFAREILRLEPMAAFAPC

Sequences:

>Translated_223_residues
METSRVRFLRYRTHLLLTYVIVAYLWDPKHALAAALGSLLPDLDHPSSVASRALVPLEKATLLPLRRLINTVVGHRGILH
WPVPWALGAFLAWWVGHTGLAAVLLGGCLHCLEDALTVRGVPLLVRRDGGRWRVWNLRLTPVPSDKWDAVLPPATVLLLC
LVILACPSEFHTLGLDRIPGLEKVYWTIHERVYHRLLHPFDAYVGTFAREILRLEPMAAFAPC
>Mature_223_residues
METSRVRFLRYRTHLLLTYVIVAYLWDPKHALAAALGSLLPDLDHPSSVASRALVPLEKATLLPLRRLINTVVGHRGILH
WPVPWALGAFLAWWVGHTGLAAVLLGGCLHCLEDALTVRGVPLLVRRDGGRWRVWNLRLTPVPSDKWDAVLPPATVLLLC
LVILACPSEFHTLGLDRIPGLEKVYWTIHERVYHRLLHPFDAYVGTFAREILRLEPMAAFAPC

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25083; Mature: 25083

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSRVRFLRYRTHLLLTYVIVAYLWDPKHALAAALGSLLPDLDHPSSVASRALVPLEKA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH
TLLPLRRLINTVVGHRGILHWPVPWALGAFLAWWVGHTGLAAVLLGGCLHCLEDALTVRG
HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPLLVRRDGGRWRVWNLRLTPVPSDKWDAVLPPATVLLLCLVILACPSEFHTLGLDRIPG
CEEEEEECCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHCCC
LEKVYWTIHERVYHRLLHPFDAYVGTFAREILRLEPMAAFAPC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
METSRVRFLRYRTHLLLTYVIVAYLWDPKHALAAALGSLLPDLDHPSSVASRALVPLEKA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH
TLLPLRRLINTVVGHRGILHWPVPWALGAFLAWWVGHTGLAAVLLGGCLHCLEDALTVRG
HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPLLVRRDGGRWRVWNLRLTPVPSDKWDAVLPPATVLLLCLVILACPSEFHTLGLDRIPG
CEEEEEECCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHCCC
LEKVYWTIHERVYHRLLHPFDAYVGTFAREILRLEPMAAFAPC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA