| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094612
Identifier: 20094612
GI number: 20094612
Start: 1167393
End: 1167758
Strand: Reverse
Name: 20094612
Synonym: MK1176
Alternate gene names: NA
Gene position: 1167758-1167393 (Counterclockwise)
Preceding gene: 20094615
Following gene: 20094611
Centisome position: 68.9
GC content: 62.3
Gene sequence:
>366_bases GTGTCGGTTCCGAAGTACCTCCCACTCCTCATCGCCGTAGTCGCCACCGCTTCCCCCGCCTCAGGATACCTCGGAGTAGA GGCCTTCGTCACGGGGATCTCCGCCGACCACGTCGACGTCGTCTACATGGTGTACGCCGACAGTGACGACGTGACCAAGT CCCACCGTGTGACCCTGTACCTACCGCCCGAAGCCACGATCAAGGGCGTGAAGTCTTACCAGCTGCCCCGTCGGGAAGGT GACGTCGACGTCGTCTACGGACAGGGGGACTGGAAGCCGGAAACTGGTACCTGGTCCGAGACGGCGAGATCCGACCCGAG GTCGAGCTTCCCTAAGAGGCCGCCAATGAGCTCTACGTGTACATGA
Upstream 100 bases:
>100_bases CCCAATTTACGTACCGTTCGTAACACGAGACCCCCGCGTATACGTCCCGAAAGATAAATGTGGATATCTTAAAGATAAGT TGTGCGGGGCAGGGAGGCCC
Downstream 100 bases:
>100_bases GCGTAATCTCCAAGGATCCGGGCACGATCACCGTGGTCGTGAGGGTCGACGATGAGGCTCTTTCCAAGGCGTACAGCGCC GATAAGGGCGCGCGGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSVPKYLPLLIAVVATASPASGYLGVEAFVTGISADHVDVVYMVYADSDDVTKSHRVTLYLPPEATIKGVKSYQLPRREG DVDVVYGQGDWKPETGTWSETARSDPRSSFPKRPPMSSTCT
Sequences:
>Translated_121_residues MSVPKYLPLLIAVVATASPASGYLGVEAFVTGISADHVDVVYMVYADSDDVTKSHRVTLYLPPEATIKGVKSYQLPRREG DVDVVYGQGDWKPETGTWSETARSDPRSSFPKRPPMSSTCT >Mature_120_residues SVPKYLPLLIAVVATASPASGYLGVEAFVTGISADHVDVVYMVYADSDDVTKSHRVTLYLPPEATIKGVKSYQLPRREGD VDVVYGQGDWKPETGTWSETARSDPRSSFPKRPPMSSTCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13168; Mature: 13037
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPKYLPLLIAVVATASPASGYLGVEAFVTGISADHVDVVYMVYADSDDVTKSHRVTLY CCCCHHHHHHHHHHHCCCCCCCCEEHHHHEECCCCCCEEEEEEEEECCCCCCCCCEEEEE LPPEATIKGVKSYQLPRREGDVDVVYGQGDWKPETGTWSETARSDPRSSFPKRPPMSSTC ECCCHHHHCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T C >Mature Secondary Structure SVPKYLPLLIAVVATASPASGYLGVEAFVTGISADHVDVVYMVYADSDDVTKSHRVTLY CCCHHHHHHHHHHHCCCCCCCCEEHHHHEECCCCCCEEEEEEEEECCCCCCCCCEEEEE LPPEATIKGVKSYQLPRREGDVDVVYGQGDWKPETGTWSETARSDPRSSFPKRPPMSSTC ECCCHHHHCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA