| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094549
Identifier: 20094549
GI number: 20094549
Start: 1084374
End: 1084985
Strand: Reverse
Name: 20094549
Synonym: MK1113
Alternate gene names: NA
Gene position: 1084985-1084374 (Counterclockwise)
Preceding gene: 20094550
Following gene: 20094548
Centisome position: 64.01
GC content: 64.22
Gene sequence:
>612_bases TTGCACGAACTACTCACATTCCTCCTGACCGTACTCTCTCCGGTCGCAGGACTCGTCGACGGTGGCTCGATGTACCTCAC CCCAGACGTGCACACGGTCGTCGGCACCCAGTGGGACGTCACGAGGGTCGTCCTCACCACGCCCGAACTGGATGAGGGGG CAGTGTTCGTCCGCGAGGGTGATCGTTGGCGGGAGACGATGGAGGAAACCAGTACCCGCTTCGGATCCCTCCGACGGCTC GACGATGTTCGAGTTCGGTGGAGCGGAGGGCTCCTCCACGTTCAGTGCCCGAAGTCCGCGGAAGTACTCCTGTTGGTACC CGATCCGGAGGGAATTCCGGTAACCGAGGGCTCGACCTTCCTGGAGGGCGGCCCCCTACCCGAGGGCGCGCACGTACTCC TCGGTGGGTGCGTCCGGATCCGCCGGTACAGGGGCCCCGTCGTCCTCGAAATCCCCTTCGAAACCGCCCGCGAGTCGATC GTGAGCGTACGCTGGATCGAGGGTACGACTTACTACGAGTACACTGACTGGGCCGCACACGACTGGGATCGGAGGTTTCG ACCGGCTTTCCTGCTGCCTGCGCTGGTGTCGTGCGTACGCAGGTGTGGGTGA
Upstream 100 bases:
>100_bases CGCCAGGAACCCGTGTGAACCGTCGAGAGCGCGTGAGAAAGCCCGGTGGGTACGATCCCGATCCACCAACTCCTGGAATC CGGTGAAGGGAAGGGTCGAA
Downstream 100 bases:
>100_bases AACCTCGCGTGGTCCGGGCCTCCCGTCACGTAGGGCGTGAAGAGGCCGCCGCGATCCCCCAACGCCTCCATACTTTTTAA ACTCGAACGGTGAGTTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MHELLTFLLTVLSPVAGLVDGGSMYLTPDVHTVVGTQWDVTRVVLTTPELDEGAVFVREGDRWRETMEETSTRFGSLRRL DDVRVRWSGGLLHVQCPKSAEVLLLVPDPEGIPVTEGSTFLEGGPLPEGAHVLLGGCVRIRRYRGPVVLEIPFETARESI VSVRWIEGTTYYEYTDWAAHDWDRRFRPAFLLPALVSCVRRCG
Sequences:
>Translated_203_residues MHELLTFLLTVLSPVAGLVDGGSMYLTPDVHTVVGTQWDVTRVVLTTPELDEGAVFVREGDRWRETMEETSTRFGSLRRL DDVRVRWSGGLLHVQCPKSAEVLLLVPDPEGIPVTEGSTFLEGGPLPEGAHVLLGGCVRIRRYRGPVVLEIPFETARESI VSVRWIEGTTYYEYTDWAAHDWDRRFRPAFLLPALVSCVRRCG >Mature_203_residues MHELLTFLLTVLSPVAGLVDGGSMYLTPDVHTVVGTQWDVTRVVLTTPELDEGAVFVREGDRWRETMEETSTRFGSLRRL DDVRVRWSGGLLHVQCPKSAEVLLLVPDPEGIPVTEGSTFLEGGPLPEGAHVLLGGCVRIRRYRGPVVLEIPFETARESI VSVRWIEGTTYYEYTDWAAHDWDRRFRPAFLLPALVSCVRRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22778; Mature: 22778
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELLTFLLTVLSPVAGLVDGGSMYLTPDVHTVVGTQWDVTRVVLTTPELDEGAVFVREG CHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCCEEEEECC DRWRETMEETSTRFGSLRRLDDVRVRWSGGLLHVQCPKSAEVLLLVPDPEGIPVTEGSTF HHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCEECCCCCE LEGGPLPEGAHVLLGGCVRIRRYRGPVVLEIPFETARESIVSVRWIEGTTYYEYTDWAAH ECCCCCCCCCHHHHHHHHEEEECCCCEEEEECHHHHHHHHEEEEEECCCEEEEECCCCCC DWDRRFRPAFLLPALVSCVRRCG CCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MHELLTFLLTVLSPVAGLVDGGSMYLTPDVHTVVGTQWDVTRVVLTTPELDEGAVFVREG CHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCCEEEEECC DRWRETMEETSTRFGSLRRLDDVRVRWSGGLLHVQCPKSAEVLLLVPDPEGIPVTEGSTF HHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCEECCCCCE LEGGPLPEGAHVLLGGCVRIRRYRGPVVLEIPFETARESIVSVRWIEGTTYYEYTDWAAH ECCCCCCCCCHHHHHHHHEEEECCCCEEEEECHHHHHHHHEEEEEECCCEEEEECCCCCC DWDRRFRPAFLLPALVSCVRRCG CCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA