| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094548
Identifier: 20094548
GI number: 20094548
Start: 1082635
End: 1084164
Strand: Reverse
Name: 20094548
Synonym: MK1112
Alternate gene names: NA
Gene position: 1084164-1082635 (Counterclockwise)
Preceding gene: 20094549
Following gene: 20094546
Centisome position: 63.96
GC content: 59.35
Gene sequence:
>1530_bases GTGCTACTTTCGTTGGTGTTGATTGGTATCCTGCCGCTGCCACCTTCGGCTTCCGCCGCGACCGTATACGTGCACGTAGT CCCCTACCTCGATAGTGACGCGTGGTCCCAGGACCACGTCGCCGCACTGAAGGAGTTCCTCTCATGGTGCGAAGAGCGTG GCATCAAAGTCGCAGTATTCCACTACAACGTCTGTGAGGAGACGGCGCCGGGTATCACGGACTTGATCCGAGAGTACGCC GAGCGGGGCACGATCAGTCTGGTCGGACTACACTCGACATCCCACGCCTTAGGGGGTCTTCCCCTCAGCCTTCAGTACTG GGAGCTCGAGTTCAACCTGCAATTCCTCAGGGACCGAGTGGGGAGCAACGTCGCCCAGGTCCTATCCGTCCCTTCGTGGG TGTTCGACGCCAACACCCTGTACGCCTGCGATAAACTCGGGGTGCGGGTGATAGTCTGTGGCACCGACATCACGGCGATC AATCCCGATTACGATCCAACATGGGACCGACTGGATCCCATAGCCAGACATATGCTAGTGGGGTATTTCAACGTCCGTGG GGACCGACTGTACTACATACCCGCCTTGAGCTACGTCTCGGACCTGGTGCAAGCGGCCGAGGATCGTGGGACGACGGTTC GAGAGCTCCTCCAGAACGCCGTGAGAAACCTCATAGATAGCGGTGTCATAAACGTCACCGGCGACGTACACCTTGCCCCA TGGGTACTCATCCATCCATGGGAACTCGCGGACGCCGACGTCCGGCAGGAGTTCGAGAACTTCCTTTCGGAGGTCGGGAA TGGATCCTTCGACTTCGAGTACCAGGGAGTCACGGTAACGTTCGAACTCAGCGACCCTCGCGAGGTAGTTAACATGATAT CCTCAGGGGGAACCAATCTGGGGCTCGTCGCACTACCGGAGCCCGATTACTCCAGCATCTTACACGCGGCCGATTACCAC CATTGGTGGGAGCTCATCGACCTGTACCCGGACAAGTCGAAGATCGTGCGGGAGTGGCTGGACACGATGTCACGGTGGCG GGCCTTAGACTCCGCCCTCTGGGACCTCACCGTGAACGGTGTCATCGATGATTCCATCCGAAAGGACCTGTACCGTGCCG TGGAGCGGGTTTGGAACGAAGCACTTCTCGAGAACGTTCTGGAGTACTGGGACCCGAGCTCGGCCCGTTGGTCCCTCCTC GAAGAGCGGAAAGCCCTCAGCACTGTCTACCGGGAGATACTGACACTGCACGCCGAGCTGGTGGGTTCGATGGTACAGCA GAGTCGGGTCGAATCGCTCGAGCGGGAGATCAATCGGCTGGAACAGGGTCTCGAGGACCTCTCGCGGAGACAACAGGATC TCGAACGTCGGCTCGAGTCACTCGAACGGGAGTTTCAGGGGCTGAAAAAGCAGAAATCGAAACGTGGGCTGCCGGTGCTG CCTGCCCCACTCTGGTGGAAGCGACGTAATCCCTTCGGTCGGAGACATCGCTGCTCCAGGGAGGGCCCGTCACACCCGTT CTGTCGCTAG
Upstream 100 bases:
>100_bases AAACATCACAGAACCTATAACCCCACAAAATCTACATAGAACCCAACTTTAGACCACATATGCTAACTCCAAGCCCGGGA TATGCACCGGGGGTCCGGCG
Downstream 100 bases:
>100_bases CTCGCTCATGATATAAGATCGTACGTAGCCCGACGTTCCTCACCATCCGAACCCTCCGACGCTCGAATCGTCACAATATC CGAAACGTTTTGAGGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MLLSLVLIGILPLPPSASAATVYVHVVPYLDSDAWSQDHVAALKEFLSWCEERGIKVAVFHYNVCEETAPGITDLIREYA ERGTISLVGLHSTSHALGGLPLSLQYWELEFNLQFLRDRVGSNVAQVLSVPSWVFDANTLYACDKLGVRVIVCGTDITAI NPDYDPTWDRLDPIARHMLVGYFNVRGDRLYYIPALSYVSDLVQAAEDRGTTVRELLQNAVRNLIDSGVINVTGDVHLAP WVLIHPWELADADVRQEFENFLSEVGNGSFDFEYQGVTVTFELSDPREVVNMISSGGTNLGLVALPEPDYSSILHAADYH HWWELIDLYPDKSKIVREWLDTMSRWRALDSALWDLTVNGVIDDSIRKDLYRAVERVWNEALLENVLEYWDPSSARWSLL EERKALSTVYREILTLHAELVGSMVQQSRVESLEREINRLEQGLEDLSRRQQDLERRLESLEREFQGLKKQKSKRGLPVL PAPLWWKRRNPFGRRHRCSREGPSHPFCR
Sequences:
>Translated_509_residues MLLSLVLIGILPLPPSASAATVYVHVVPYLDSDAWSQDHVAALKEFLSWCEERGIKVAVFHYNVCEETAPGITDLIREYA ERGTISLVGLHSTSHALGGLPLSLQYWELEFNLQFLRDRVGSNVAQVLSVPSWVFDANTLYACDKLGVRVIVCGTDITAI NPDYDPTWDRLDPIARHMLVGYFNVRGDRLYYIPALSYVSDLVQAAEDRGTTVRELLQNAVRNLIDSGVINVTGDVHLAP WVLIHPWELADADVRQEFENFLSEVGNGSFDFEYQGVTVTFELSDPREVVNMISSGGTNLGLVALPEPDYSSILHAADYH HWWELIDLYPDKSKIVREWLDTMSRWRALDSALWDLTVNGVIDDSIRKDLYRAVERVWNEALLENVLEYWDPSSARWSLL EERKALSTVYREILTLHAELVGSMVQQSRVESLEREINRLEQGLEDLSRRQQDLERRLESLEREFQGLKKQKSKRGLPVL PAPLWWKRRNPFGRRHRCSREGPSHPFCR >Mature_509_residues MLLSLVLIGILPLPPSASAATVYVHVVPYLDSDAWSQDHVAALKEFLSWCEERGIKVAVFHYNVCEETAPGITDLIREYA ERGTISLVGLHSTSHALGGLPLSLQYWELEFNLQFLRDRVGSNVAQVLSVPSWVFDANTLYACDKLGVRVIVCGTDITAI NPDYDPTWDRLDPIARHMLVGYFNVRGDRLYYIPALSYVSDLVQAAEDRGTTVRELLQNAVRNLIDSGVINVTGDVHLAP WVLIHPWELADADVRQEFENFLSEVGNGSFDFEYQGVTVTFELSDPREVVNMISSGGTNLGLVALPEPDYSSILHAADYH HWWELIDLYPDKSKIVREWLDTMSRWRALDSALWDLTVNGVIDDSIRKDLYRAVERVWNEALLENVLEYWDPSSARWSLL EERKALSTVYREILTLHAELVGSMVQQSRVESLEREINRLEQGLEDLSRRQQDLERRLESLEREFQGLKKQKSKRGLPVL PAPLWWKRRNPFGRRHRCSREGPSHPFCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58196; Mature: 58196
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSLVLIGILPLPPSASAATVYVHVVPYLDSDAWSQDHVAALKEFLSWCEERGIKVAVF CHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE HYNVCEETAPGITDLIREYAERGTISLVGLHSTSHALGGLPLSLQYWELEFNLQFLRDRV EEEHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHHCCCCEEEEEEEEEHHHHHHHHHH GSNVAQVLSVPSWVFDANTLYACDKLGVRVIVCGTDITAINPDYDPTWDRLDPIARHMLV CCHHHHHHCCCHHHCCCCHHEEHHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHH GYFNVRGDRLYYIPALSYVSDLVQAAEDRGTTVRELLQNAVRNLIDSGVINVTGDVHLAP HHEEECCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECC WVLIHPWELADADVRQEFENFLSEVGNGSFDFEYQGVTVTFELSDPREVVNMISSGGTNL EEEEECHHCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHHHHHHHCCCCCE GLVALPEPDYSSILHAADYHHWWELIDLYPDKSKIVREWLDTMSRWRALDSALWDLTVNG EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC VIDDSIRKDLYRAVERVWNEALLENVLEYWDPSSARWSLLEERKALSTVYREILTLHAEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGSMVQQSRVESLEREINRLEQGLEDLSRRQQDLERRLESLEREFQGLKKQKSKRGLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAPLWWKRRNPFGRRHRCSREGPSHPFCR CCCCCCCCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MLLSLVLIGILPLPPSASAATVYVHVVPYLDSDAWSQDHVAALKEFLSWCEERGIKVAVF CHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE HYNVCEETAPGITDLIREYAERGTISLVGLHSTSHALGGLPLSLQYWELEFNLQFLRDRV EEEHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHHCCCCEEEEEEEEEHHHHHHHHHH GSNVAQVLSVPSWVFDANTLYACDKLGVRVIVCGTDITAINPDYDPTWDRLDPIARHMLV CCHHHHHHCCCHHHCCCCHHEEHHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHH GYFNVRGDRLYYIPALSYVSDLVQAAEDRGTTVRELLQNAVRNLIDSGVINVTGDVHLAP HHEEECCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECC WVLIHPWELADADVRQEFENFLSEVGNGSFDFEYQGVTVTFELSDPREVVNMISSGGTNL EEEEECHHCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHHHHHHHCCCCCE GLVALPEPDYSSILHAADYHHWWELIDLYPDKSKIVREWLDTMSRWRALDSALWDLTVNG EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC VIDDSIRKDLYRAVERVWNEALLENVLEYWDPSSARWSLLEERKALSTVYREILTLHAEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGSMVQQSRVESLEREINRLEQGLEDLSRRQQDLERRLESLEREFQGLKKQKSKRGLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAPLWWKRRNPFGRRHRCSREGPSHPFCR CCCCCCCCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA