Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094550

Identifier: 20094550

GI number: 20094550

Start: 1085323

End: 1086447

Strand: Reverse

Name: 20094550

Synonym: MK1114

Alternate gene names: NA

Gene position: 1086447-1085323 (Counterclockwise)

Preceding gene: 20094551

Following gene: 20094549

Centisome position: 64.1

GC content: 63.91

Gene sequence:

>1125_bases
ATGCGAGTCCTCGTGATGGCGATAGTAGCAGTTGCGATGGTCGCGAACTCGGCAAGCGCCATCACGGGCAAAGCGACCAC
CAACGGCGCTACTCCCGAGGAGATGCTCGAGAACCTCAGGGTCCACGTCGTGGCAGAGGAAGGTGCGACGCTGGACCTGA
AAGAACATCCGGTGGTCGTGGGTGAGCACGCCGTGTACGTAGTGATGATCACCGAGGGGGACGCGAAATCGAGCGGCGAG
ACCTACGAGGAGCAGCCACTGCTGGTACCGCTCCCGAAGGACGGTGTCCGAGTAGAGGGCGACACGCTGACGGTCACGCG
ACCCGTCGACACCATCGGATACTGCCTGAGTCCCGGATCGGCCGTGCCGGGATGGAACGGCCCGGAGTCCCTCGTGGTGC
CCACCTGGGAGGGACTATCGTCCAAGCTCGCGATCGCGGTGAAGCCGGACAAGATCGAGCAGGTCCTGGCGACGGGAGTG
TGCGAGCCGGAGTGGGTCAAGTACGTCAGGATAACGCCGACCACTGTCCGCCGAGCGGTACGGATCCTGGACTCCAACGT
CGAGTGGACAAGGTACTTCTCATGGGACGCTCAGCTCAAGATCTGGGATGCGCTGTGGCCCACTGAGTCGGGATCGTCGC
TGACCGAACTACTGCCGAAGTTACTACCGACGGCCGTGCTGGCACTGCCGCTGATCGCGTACCTGACGACCCAGTACCTG
ACCTCGCACGCGGAGGGGACCTTCTCACCCGGACCCACAGGATCGACGGTTCAGTCGGTGAACCCTGGGTCCCCGCAGGA
AACGTCCGAGGCTCAACGGGAAACCCAACAGGAGGTCATCGAATCACCCTCCGGCGGTGAAGAGACGCCGACAATCACGA
CAATCACCGAGTCGACACCCTCCGAGACCATCGAGGCCCACTTCGCCGCGGTCAAGGGAGGTCCAACGACGCGTGTATCG
GCCGGGAGTTCGGTCGGCGGAGCTACCGGAAGGCCGGTAAGGACGGGAACCTCCGGCGTGTGCGTCGGGGAGCACTCCAC
CGGAACACCACCGCTGCTACCGATCCTGGCGGTGCTAGCGGCCACGACCGGCCTGTTACTATGCCGCAAAGGACTCTCGC
CCTGA

Upstream 100 bases:

>100_bases
CGCCGTCGTCGCCGCTAACGCTTCTCCTTCACGTCTCCGACTTCTTTCGACCCGATGGAGGCGTCGAGCCGGACGGCGAC
GGAGGGGGTGAAAACCCGGA

Downstream 100 bases:

>100_bases
CTTCTTTCCAGGAAATGTTACAAGGATCGTAACCTTTCGGACAGGGCATGCGGACTGTCGGACCGTCCTTCGCATCGCAG
ACGTAGATCCCACCGGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRVLVMAIVAVAMVANSASAITGKATTNGATPEEMLENLRVHVVAEEGATLDLKEHPVVVGEHAVYVVMITEGDAKSSGE
TYEEQPLLVPLPKDGVRVEGDTLTVTRPVDTIGYCLSPGSAVPGWNGPESLVVPTWEGLSSKLAIAVKPDKIEQVLATGV
CEPEWVKYVRITPTTVRRAVRILDSNVEWTRYFSWDAQLKIWDALWPTESGSSLTELLPKLLPTAVLALPLIAYLTTQYL
TSHAEGTFSPGPTGSTVQSVNPGSPQETSEAQRETQQEVIESPSGGEETPTITTITESTPSETIEAHFAAVKGGPTTRVS
AGSSVGGATGRPVRTGTSGVCVGEHSTGTPPLLPILAVLAATTGLLLCRKGLSP

Sequences:

>Translated_374_residues
MRVLVMAIVAVAMVANSASAITGKATTNGATPEEMLENLRVHVVAEEGATLDLKEHPVVVGEHAVYVVMITEGDAKSSGE
TYEEQPLLVPLPKDGVRVEGDTLTVTRPVDTIGYCLSPGSAVPGWNGPESLVVPTWEGLSSKLAIAVKPDKIEQVLATGV
CEPEWVKYVRITPTTVRRAVRILDSNVEWTRYFSWDAQLKIWDALWPTESGSSLTELLPKLLPTAVLALPLIAYLTTQYL
TSHAEGTFSPGPTGSTVQSVNPGSPQETSEAQRETQQEVIESPSGGEETPTITTITESTPSETIEAHFAAVKGGPTTRVS
AGSSVGGATGRPVRTGTSGVCVGEHSTGTPPLLPILAVLAATTGLLLCRKGLSP
>Mature_374_residues
MRVLVMAIVAVAMVANSASAITGKATTNGATPEEMLENLRVHVVAEEGATLDLKEHPVVVGEHAVYVVMITEGDAKSSGE
TYEEQPLLVPLPKDGVRVEGDTLTVTRPVDTIGYCLSPGSAVPGWNGPESLVVPTWEGLSSKLAIAVKPDKIEQVLATGV
CEPEWVKYVRITPTTVRRAVRILDSNVEWTRYFSWDAQLKIWDALWPTESGSSLTELLPKLLPTAVLALPLIAYLTTQYL
TSHAEGTFSPGPTGSTVQSVNPGSPQETSEAQRETQQEVIESPSGGEETPTITTITESTPSETIEAHFAAVKGGPTTRVS
AGSSVGGATGRPVRTGTSGVCVGEHSTGTPPLLPILAVLAATTGLLLCRKGLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39381; Mature: 39381

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVMAIVAVAMVANSASAITGKATTNGATPEEMLENLRVHVVAEEGATLDLKEHPVVV
CHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCEEEEEECCCCEEEECCCCEEE
GEHAVYVVMITEGDAKSSGETYEEQPLLVPLPKDGVRVEGDTLTVTRPVDTIGYCLSPGS
ECCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHEECCCC
AVPGWNGPESLVVPTWEGLSSKLAIAVKPDKIEQVLATGVCEPEWVKYVRITPTTVRRAV
CCCCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHCCCCHHHEEEEEECHHHHHHHH
RILDSNVEWTRYFSWDAQLKIWDALWPTESGSSLTELLPKLLPTAVLALPLIAYLTTQYL
HHHCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSHAEGTFSPGPTGSTVQSVNPGSPQETSEAQRETQQEVIESPSGGEETPTITTITESTP
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
SETIEAHFAAVKGGPTTRVSAGSSVGGATGRPVRTGTSGVCVGEHSTGTPPLLPILAVLA
HHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
ATTGLLLCRKGLSP
HHHHHHHHHCCCCC
>Mature Secondary Structure
MRVLVMAIVAVAMVANSASAITGKATTNGATPEEMLENLRVHVVAEEGATLDLKEHPVVV
CHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCEEEEEECCCCEEEECCCCEEE
GEHAVYVVMITEGDAKSSGETYEEQPLLVPLPKDGVRVEGDTLTVTRPVDTIGYCLSPGS
ECCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHEECCCC
AVPGWNGPESLVVPTWEGLSSKLAIAVKPDKIEQVLATGVCEPEWVKYVRITPTTVRRAV
CCCCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHCCCCHHHEEEEEECHHHHHHHH
RILDSNVEWTRYFSWDAQLKIWDALWPTESGSSLTELLPKLLPTAVLALPLIAYLTTQYL
HHHCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSHAEGTFSPGPTGSTVQSVNPGSPQETSEAQRETQQEVIESPSGGEETPTITTITESTP
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
SETIEAHFAAVKGGPTTRVSAGSSVGGATGRPVRTGTSGVCVGEHSTGTPPLLPILAVLA
HHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
ATTGLLLCRKGLSP
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA