| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094546
Identifier: 20094546
GI number: 20094546
Start: 1080370
End: 1081089
Strand: Reverse
Name: 20094546
Synonym: MK1110
Alternate gene names: NA
Gene position: 1081089-1080370 (Counterclockwise)
Preceding gene: 20094548
Following gene: 20094545
Centisome position: 63.78
GC content: 62.36
Gene sequence:
>720_bases ATGGAGCTTGCCGAACTCGCGGAGAAGGTGGCGGGGGAACGGCCGGAGCTGGCCGGCTGGGCGTTCAGGATCCTAGTCGA GGCCCGCGACAGACGCCAGTGGGGCATAGCCGAAGTAGCGTTCAGGAACGCGCTCGGAGAAGTCGTACGGCTCAGGGACT TGAAGAACAAGCCACCGACGACGTGGGCGAAAAAATGGTGCAAGCACGGTGTGTTCAGGGGAATGGAACCGGTGATAGCC AGGGGAGAGTTCAGGGAGTTCGTCGAGCAACTACCGGACGATTGGCTCACCACACCGGGTGAACGGGCGAGGCGGCAGCT CCTACAGGGGCACTTCAGGAAGAGCGCGGGACGGGCCAGATACGCGATCAGGATCGGCGGGATCATGTACGTGCCGACTC TCGTCGGGCCCATCGCCACGTACGGGCTCGCGTACTACCTCGTCAGGAGCGTCCCCGACCATCTACTCGCCGGAGCCAGG ACACCGATGAAGCTGGTCGAGGTGGCCGAGGAGAACGAGCTGGCCATCACGAGCAAGGATATCGAGCGCGCTGGACTGAA ACCCGAAGCACGGACGTTCAGGAATCTGCGGTACGTGACCTGCAAGGTCAGGATCTTCTTCCCGACCGAGGAATGCAAGC TGGCCGGGAGGTTCGACGTCGGTCTCTTGGAGCTCGTGACTCGGTACCGAAAGGGCATCATGGAAACGTTCACGGGCTGA
Upstream 100 bases:
>100_bases GCCCCGAAACAGTATTCGCCGACTCGGGTGATCAGGGTTCCGATCGACGCCGGGCGGCCGTACACCGAGGATCCACTCAA TCGTTCACGAGGGAGCTACG
Downstream 100 bases:
>100_bases GAAGGCGAGGGAGTCCTACGAGGACCACCGTGAGTCACAGAGGTTAGCGGAGGCGTTACCCCCCACGCCCTCTCATGAGC CCGCGGAGGGTAAGAGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MELAELAEKVAGERPELAGWAFRILVEARDRRQWGIAEVAFRNALGEVVRLRDLKNKPPTTWAKKWCKHGVFRGMEPVIA RGEFREFVEQLPDDWLTTPGERARRQLLQGHFRKSAGRARYAIRIGGIMYVPTLVGPIATYGLAYYLVRSVPDHLLAGAR TPMKLVEVAEENELAITSKDIERAGLKPEARTFRNLRYVTCKVRIFFPTEECKLAGRFDVGLLELVTRYRKGIMETFTG
Sequences:
>Translated_239_residues MELAELAEKVAGERPELAGWAFRILVEARDRRQWGIAEVAFRNALGEVVRLRDLKNKPPTTWAKKWCKHGVFRGMEPVIA RGEFREFVEQLPDDWLTTPGERARRQLLQGHFRKSAGRARYAIRIGGIMYVPTLVGPIATYGLAYYLVRSVPDHLLAGAR TPMKLVEVAEENELAITSKDIERAGLKPEARTFRNLRYVTCKVRIFFPTEECKLAGRFDVGLLELVTRYRKGIMETFTG >Mature_239_residues MELAELAEKVAGERPELAGWAFRILVEARDRRQWGIAEVAFRNALGEVVRLRDLKNKPPTTWAKKWCKHGVFRGMEPVIA RGEFREFVEQLPDDWLTTPGERARRQLLQGHFRKSAGRARYAIRIGGIMYVPTLVGPIATYGLAYYLVRSVPDHLLAGAR TPMKLVEVAEENELAITSKDIERAGLKPEARTFRNLRYVTCKVRIFFPTEECKLAGRFDVGLLELVTRYRKGIMETFTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27305; Mature: 27305
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELAELAEKVAGERPELAGWAFRILVEARDRRQWGIAEVAFRNALGEVVRLRDLKNKPPT CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC TWAKKWCKHGVFRGMEPVIARGEFREFVEQLPDDWLTTPGERARRQLLQGHFRKSAGRAR HHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCEE YAIRIGGIMYVPTLVGPIATYGLAYYLVRSVPDHLLAGARTPMKLVEVAEENELAITSKD EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHH IERAGLKPEARTFRNLRYVTCKVRIFFPTEECKLAGRFDVGLLELVTRYRKGIMETFTG HHHCCCCHHHHHHHCCEEEEEEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELAELAEKVAGERPELAGWAFRILVEARDRRQWGIAEVAFRNALGEVVRLRDLKNKPPT CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC TWAKKWCKHGVFRGMEPVIARGEFREFVEQLPDDWLTTPGERARRQLLQGHFRKSAGRAR HHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCEE YAIRIGGIMYVPTLVGPIATYGLAYYLVRSVPDHLLAGARTPMKLVEVAEENELAITSKD EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHH IERAGLKPEARTFRNLRYVTCKVRIFFPTEECKLAGRFDVGLLELVTRYRKGIMETFTG HHHCCCCHHHHHHHCCEEEEEEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA