| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094545
Identifier: 20094545
GI number: 20094545
Start: 1079336
End: 1080184
Strand: Reverse
Name: 20094545
Synonym: MK1109
Alternate gene names: NA
Gene position: 1080184-1079336 (Counterclockwise)
Preceding gene: 20094546
Following gene: 20094544
Centisome position: 63.73
GC content: 65.02
Gene sequence:
>849_bases TTGTCAGGGACGGAAACCGTCCGGCTACGGGCCGTCAGCCCCGTCACATCCCGTACTGGCGAGTCGGTCGTGGTCGACCT CCGGGAAGACCTGCGTCGGCATCTCCGGGCGCTTCTGGGGCGGTGTTTGGAGCGAGGAGAGGTACGCCGGATAGAGACCG CACTGTTCGGTGGAACGGTAAACGGTGAAACGATCTTCCCGGCGGTGGAGTTCCGGCTGGTCGGAGACGAGCTCCCTAGG TATCCGGCCGGCTCGGTGTTCGAGTTGGAGGTGAGAGTCGAGAGTCGAGAATTACCCTGGTCGATCCTGAGCCGCTACTC GGACGATCCCGTGGAGTTCGCATCGGAGTGTCTGGGTTGGGCGCTGGAGCTCCTCTCACTGCTGGGAGGTGTCGGCGCAC AATCGGACCTCTGTGCAGGCTCGCTCCTGTGGGAGGGTCGGGAACCGCGTCGTCCCGTGGACGTGCTCTCGCGGACGGAC GCGGCGCTGAGGTGGGTGGAGGCAAAGTTCGGGGACGTGCCGGACCGATCACCGAGGTTCGCGGCGTTCCGGGACGGCTA CTTCCTCGTCGCGGTCGGTCCCACGGGAGATCTATACGAAGTGTTGGGCCGGGTGGAAAGCGTTTACAATCGGCTCGCAC GAGCCCGATTCCGACTGGTACTCCAGGTGAAGCGGACGCGTGACGGACTCCATTTCCCCGTCGCCGTGGCGTTCGCGCGC CACGCACGGGAGCGAGTCGAACTGCAACGGGCGGCAGCGACGTTTCTGGACCTAGGTTGGGAGACACTCCCGAAGCTGCT CGACCTAGCGGCGGAGTCGGGCCGTCGATCGAGACCGATCCGCTTCTAA
Upstream 100 bases:
>100_bases GAGGGTAAGAGCTAAGGAGCGTTCGGCATACTACCCGGTCGAGACCAGTTCCACGTCCCGGGACCTTTACTTTCAGGAAC GTCACATCGGGTGACGGGGG
Downstream 100 bases:
>100_bases GGTGTAGAGCCGGCCTGAGCGGCGGGGCCTTCGTTGGAGTACGGGTGTCTGATCGGGGGAGAGTGGCTCGAAGGCGACCG AGAGATCGTAGTGGAGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSGTETVRLRAVSPVTSRTGESVVVDLREDLRRHLRALLGRCLERGEVRRIETALFGGTVNGETIFPAVEFRLVGDELPR YPAGSVFELEVRVESRELPWSILSRYSDDPVEFASECLGWALELLSLLGGVGAQSDLCAGSLLWEGREPRRPVDVLSRTD AALRWVEAKFGDVPDRSPRFAAFRDGYFLVAVGPTGDLYEVLGRVESVYNRLARARFRLVLQVKRTRDGLHFPVAVAFAR HARERVELQRAAATFLDLGWETLPKLLDLAAESGRRSRPIRF
Sequences:
>Translated_282_residues MSGTETVRLRAVSPVTSRTGESVVVDLREDLRRHLRALLGRCLERGEVRRIETALFGGTVNGETIFPAVEFRLVGDELPR YPAGSVFELEVRVESRELPWSILSRYSDDPVEFASECLGWALELLSLLGGVGAQSDLCAGSLLWEGREPRRPVDVLSRTD AALRWVEAKFGDVPDRSPRFAAFRDGYFLVAVGPTGDLYEVLGRVESVYNRLARARFRLVLQVKRTRDGLHFPVAVAFAR HARERVELQRAAATFLDLGWETLPKLLDLAAESGRRSRPIRF >Mature_281_residues SGTETVRLRAVSPVTSRTGESVVVDLREDLRRHLRALLGRCLERGEVRRIETALFGGTVNGETIFPAVEFRLVGDELPRY PAGSVFELEVRVESRELPWSILSRYSDDPVEFASECLGWALELLSLLGGVGAQSDLCAGSLLWEGREPRRPVDVLSRTDA ALRWVEAKFGDVPDRSPRFAAFRDGYFLVAVGPTGDLYEVLGRVESVYNRLARARFRLVLQVKRTRDGLHFPVAVAFARH ARERVELQRAAATFLDLGWETLPKLLDLAAESGRRSRPIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31649; Mature: 31517
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTETVRLRAVSPVTSRTGESVVVDLREDLRRHLRALLGRCLERGEVRRIETALFGGTV CCCCCEEEEEEECCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC NGETIFPAVEFRLVGDELPRYPAGSVFELEVRVESRELPWSILSRYSDDPVEFASECLGW CCCEECCCCEEEEECHHCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHH ALELLSLLGGVGAQSDLCAGSLLWEGREPRRPVDVLSRTDAALRWVEAKFGDVPDRSPRF HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AAFRDGYFLVAVGPTGDLYEVLGRVESVYNRLARARFRLVLQVKRTRDGLHFPVAVAFAR EEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HARERVELQRAAATFLDLGWETLPKLLDLAAESGRRSRPIRF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SGTETVRLRAVSPVTSRTGESVVVDLREDLRRHLRALLGRCLERGEVRRIETALFGGTV CCCCEEEEEEECCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC NGETIFPAVEFRLVGDELPRYPAGSVFELEVRVESRELPWSILSRYSDDPVEFASECLGW CCCEECCCCEEEEECHHCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHH ALELLSLLGGVGAQSDLCAGSLLWEGREPRRPVDVLSRTDAALRWVEAKFGDVPDRSPRF HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AAFRDGYFLVAVGPTGDLYEVLGRVESVYNRLARARFRLVLQVKRTRDGLHFPVAVAFAR EEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HARERVELQRAAATFLDLGWETLPKLLDLAAESGRRSRPIRF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA