Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094472

Identifier: 20094472

GI number: 20094472

Start: 998337

End: 999296

Strand: Reverse

Name: 20094472

Synonym: MK1036

Alternate gene names: NA

Gene position: 999296-998337 (Counterclockwise)

Preceding gene: 20094473

Following gene: 20094470

Centisome position: 58.96

GC content: 61.88

Gene sequence:

>960_bases
TTGCCCGCCCTCGTGCTGATAATCGCGGTATCCATCGCGATGACGCCCGCTCACGGTCGAGTGGGAGGGTTCGTCTCCGG
TCATTACTACTTAGACCCGGAGTTCGACGCTCCGAACACCTCTTTCGGGTCCGATATCGACGGAGATGGGCGCGTTGACA
GGATCTGGTGCGCGGAGGCGTGCGCGGTGGACATGTACAACTTGGGTGTCGCCATGGGATGGTGGAACGGCGATCCCGTG
ACCCCACTTCAGTACGAGATTTCGGCTACGGGGGAACACGACGACGATAACCTCGACATCATCGACGCCTTCCAGGCGAT
CGCGGGCTCGGATGCGGCCTCGAAAGTGTTCGAGGTAGCCGTGGTCTCGTTGTTGAACCGTCCCTCGGTGTACCACGCGG
TACTCGTCCTCGGGGCCGTCCAAGAGGGATCTCGTCGCTACTTCGTCGTGGACGACGAGTCCACGAGCGACGTGGGGGAG
CTTTTGCTGGTCCCTTACGATCTCTTCCTTTCCAACCTTCACCCCGGTATCCTGGAGTTCTTCGGGCCCGTGGAGGTCGT
GAACAGGTTGTACTCGGTACTCTCCGGCGCTATCTCCCCGCTGACGGTTATCGTGTCCTCTAAGCGCGGTCGTACCCTCA
CGGTCGTCCTGTTGACAGACCTACCCGGTGACTCCCTGGCGGCGTTCACGGAAGAGTTGTGGAAGGCCGCTCTGGAGGGG
TACCCCGTCGCCGTCGCGGTTTCCAAACCGTTCCTGGACCTCGGCGGTGTGACCCGGATCCGCTGCGACGCACCGGTGAC
GGGAGACGTCGAGACGCGGAGACCACTGAACGGTGTGGAGAGCGGGGAGGGTCCATCACCCCCCCTAGGGATACCGATAC
CTTTCATCGGGACCGTCGGGATCGCGGGATTGTTCTTCCTTCTGCTGACGTTCCTCGGGCTCTCTTACCTACCGGTCTAG

Upstream 100 bases:

>100_bases
GGTGTGGGGAGAAGGGAAGGTCCTCCGGCGGGGGACGCTGTTCTCGGGGATGAGAACGTCCTACCTGGCGCTCTTCGAGC
CCGAGAGGTGAACCCGAATG

Downstream 100 bases:

>100_bases
TCCCAGAACCGACGGGTGCGGAGGTAACGGAGGCGCTCCTGCAGTAGCTCACGGTAGAAGTGCGGCTCACGTCCGCCGGT
CGATCGGAGCACCTTAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MPALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEACAVDMYNLGVAMGWWNGDPV
TPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVAVVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGE
LLLVPYDLFLSNLHPGILEFFGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG
YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVGIAGLFFLLLTFLGLSYLPV

Sequences:

>Translated_319_residues
MPALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEACAVDMYNLGVAMGWWNGDPV
TPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVAVVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGE
LLLVPYDLFLSNLHPGILEFFGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG
YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVGIAGLFFLLLTFLGLSYLPV
>Mature_318_residues
PALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEACAVDMYNLGVAMGWWNGDPVT
PLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVAVVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGEL
LLVPYDLFLSNLHPGILEFFGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEGY
PVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVGIAGLFFLLLTFLGLSYLPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33968; Mature: 33837

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEA
CCHHHEEEHHHHHCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHH
CAVDMYNLGVAMGWWNGDPVTPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVA
HHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
VVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGELLLVPYDLFLSNLHPGILEF
HHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEEHHHHHHHHCCCHHHHHH
FGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC
YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVG
CCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IAGLFFLLLTFLGLSYLPV
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEA
CHHHEEEHHHHHCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHH
CAVDMYNLGVAMGWWNGDPVTPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVA
HHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
VVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGELLLVPYDLFLSNLHPGILEF
HHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEEHHHHHHHHCCCHHHHHH
FGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC
YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVG
CCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IAGLFFLLLTFLGLSYLPV
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA