| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094412
Identifier: 20094412
GI number: 20094412
Start: 936332
End: 938134
Strand: Direct
Name: 20094412
Synonym: MK0976
Alternate gene names: NA
Gene position: 936332-938134 (Clockwise)
Preceding gene: 20094410
Following gene: 20094413
Centisome position: 55.24
GC content: 61.29
Gene sequence:
>1803_bases GTGCTCCGTCGGATTCCGCGACCTTATACGAGAACACGGCCTCTTCTTCCTCCTTCGGGTCCCTCTCCGGTAGGAACATT TGACGACCACCTCTTCCCACGTACACGTACACTTCCACACGGGTCCCCGGGGGGAACCCGCCCGTTGGCCCGTCTTATGC GTTTGTCCTTCCGACTGCCCTCCCTCCGAGATTGCGTCTTAGGATGGATCCTCCTCCTAGGAATCTCCGCGCTATACTCG CCCCACTTGACGGTCTACGTGACGTTACCCGCGCTTGCTTCATTCGTCATCTTACTACTGGACCGTCTCGCTAAGCGGGA CGTGCCCCCGAATCGGTGGCCTTTCGTCGGTTTAGTCTACGCGGTACCGTTAGTCCTGAGTGTCCCACTAGGGACCGTCG CAGTCGCCGTCACGAAAGGCGTAATGTCGACGTTCTTGACCTTGGCTCTGCTCGGAACGGTTCGCTCCGGGGTACTCCGG GCGGTTCCCGTGCTCGCGTACCTCGTGATAGACTCGCTGGCCCTGGCTACCTTGACCGGAGTTCCCCTCCCACCACTCCT TCTGGCATCACTCACGGGAGGCGTCGTCGGGGCCGCCGTGGTGGCCGTTGTCGACACACTGACCTTGGCATCACTCGGCA TCCGGACAACCGACGCCTTCGGAGAATTCCTGTCCTTCAAATCGGGCCGCGATCACTCCCTGCACTCCCTTTTCAGGGGA ATGGAGACTCGAACGCGGGTTCGGGTTCCAGTCCGGGTATTCGCGTTCATGACCAAGAACGGCGACGTGAAGGGTTGTTT CGTGATTCCTTGGATCCATCCTGGCCCGCTGGGTGACGTGGGAGGAGGGGACCTCCCCGGCAGGATCGTGCGACGGTTGC TGAAGGAGGGGATCGTACCCCTCGTTTTCCACTCCACGACAACGCACGATTTCAACCCGGTGGATCGGCGGGAAGCGGGT AAGATCGTGGAAGAGACCGTCAGATTGGTGCGCGAGGCTGCGGATCGAGAGGGTTGTAGTGTAGGTTCCGCTCCGGTCCG CGGGGAAGAGACGGACTCGGTCGGACAAATATTGGGGGATAGACTCTTCCTAGTGCTGTCGAAGTACCCAGAGCCCAGCG ACGACATAGACGCTGCCACCGGGATAGCCCTCGAACGCGAGACCGGTGGCTGGGTTGCGGACTGCCACAACTGCTTCGGA GACCCCGATCGTGGGAGGGTTTACGCGTTCTCCGAGGACTTCTGGCGGCTCATGCGGGACGCTCGTAGAATCTCTGAGAG GGTGGAACCGACCCCCGGACTCAGGGCGGGATTCGATCACGCCGACCCAGGCCTCGACCCTGAAACGGGCTTGGGCAGCG GTGGGGTCTCCGTGGCAGCGGTGGAGGCTGATGGAACGCGCACACTATACGTCGTGTTCGACTCGAACAGCATCGTCCGC GAGCTCAAAGAAGAGGTAGAGCGGACGCTACGGGACCTCGCCGAAGAGGTCGTGGTCTGCACGTCTGACTCTCACGAGGT TAATCCCAGGGGCTACAACCCGCTCGGGCAGATAATGGGACGAAACGATAAGAGGAGGTTACTGAAGGCCGTCAGATGCG CGGCCGAGGGGGCGATCGAGGATCTCGAAGAGTGCGAGGTGGTCCCCGTGGAGGGATGGGTGAAGGTAGAAGTCACGGGT CCGGGGAGCTTCCAGCGACTCGTTCACTCCGTGGAGACGACCAGGACGGTGATCGGAGTACTCCTTCCGACGGCGTTCTT GGGGGTGGCCCTTCTTTCGCTCCTATTCGGAATCCGCACGTGA
Upstream 100 bases:
>100_bases ACACCGACGACCATCTCGGGGTCAGTGAGGGTTCCGTACGCAAAGACACGCTCCGGGGGAAGGTCTTTTGACGGTTCCTC CTCGGTCGGAGTGACTACCA
Downstream 100 bases:
>100_bases TGGTACGAGGGTATACTGTACGGCCTTCGGCCTTGGATTCGGTCACGCTTCGAGGACTGTGGGGCTCGGTAGAGAGCTAC GTCGGATCGGACTGGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MLRRIPRPYTRTRPLLPPSGPSPVGTFDDHLFPRTRTLPHGSPGGTRPLARLMRLSFRLPSLRDCVLGWILLLGISALYS PHLTVYVTLPALASFVILLLDRLAKRDVPPNRWPFVGLVYAVPLVLSVPLGTVAVAVTKGVMSTFLTLALLGTVRSGVLR AVPVLAYLVIDSLALATLTGVPLPPLLLASLTGGVVGAAVVAVVDTLTLASLGIRTTDAFGEFLSFKSGRDHSLHSLFRG METRTRVRVPVRVFAFMTKNGDVKGCFVIPWIHPGPLGDVGGGDLPGRIVRRLLKEGIVPLVFHSTTTHDFNPVDRREAG KIVEETVRLVREAADREGCSVGSAPVRGEETDSVGQILGDRLFLVLSKYPEPSDDIDAATGIALERETGGWVADCHNCFG DPDRGRVYAFSEDFWRLMRDARRISERVEPTPGLRAGFDHADPGLDPETGLGSGGVSVAAVEADGTRTLYVVFDSNSIVR ELKEEVERTLRDLAEEVVVCTSDSHEVNPRGYNPLGQIMGRNDKRRLLKAVRCAAEGAIEDLEECEVVPVEGWVKVEVTG PGSFQRLVHSVETTRTVIGVLLPTAFLGVALLSLLFGIRT
Sequences:
>Translated_600_residues MLRRIPRPYTRTRPLLPPSGPSPVGTFDDHLFPRTRTLPHGSPGGTRPLARLMRLSFRLPSLRDCVLGWILLLGISALYS PHLTVYVTLPALASFVILLLDRLAKRDVPPNRWPFVGLVYAVPLVLSVPLGTVAVAVTKGVMSTFLTLALLGTVRSGVLR AVPVLAYLVIDSLALATLTGVPLPPLLLASLTGGVVGAAVVAVVDTLTLASLGIRTTDAFGEFLSFKSGRDHSLHSLFRG METRTRVRVPVRVFAFMTKNGDVKGCFVIPWIHPGPLGDVGGGDLPGRIVRRLLKEGIVPLVFHSTTTHDFNPVDRREAG KIVEETVRLVREAADREGCSVGSAPVRGEETDSVGQILGDRLFLVLSKYPEPSDDIDAATGIALERETGGWVADCHNCFG DPDRGRVYAFSEDFWRLMRDARRISERVEPTPGLRAGFDHADPGLDPETGLGSGGVSVAAVEADGTRTLYVVFDSNSIVR ELKEEVERTLRDLAEEVVVCTSDSHEVNPRGYNPLGQIMGRNDKRRLLKAVRCAAEGAIEDLEECEVVPVEGWVKVEVTG PGSFQRLVHSVETTRTVIGVLLPTAFLGVALLSLLFGIRT >Mature_600_residues MLRRIPRPYTRTRPLLPPSGPSPVGTFDDHLFPRTRTLPHGSPGGTRPLARLMRLSFRLPSLRDCVLGWILLLGISALYS PHLTVYVTLPALASFVILLLDRLAKRDVPPNRWPFVGLVYAVPLVLSVPLGTVAVAVTKGVMSTFLTLALLGTVRSGVLR AVPVLAYLVIDSLALATLTGVPLPPLLLASLTGGVVGAAVVAVVDTLTLASLGIRTTDAFGEFLSFKSGRDHSLHSLFRG METRTRVRVPVRVFAFMTKNGDVKGCFVIPWIHPGPLGDVGGGDLPGRIVRRLLKEGIVPLVFHSTTTHDFNPVDRREAG KIVEETVRLVREAADREGCSVGSAPVRGEETDSVGQILGDRLFLVLSKYPEPSDDIDAATGIALERETGGWVADCHNCFG DPDRGRVYAFSEDFWRLMRDARRISERVEPTPGLRAGFDHADPGLDPETGLGSGGVSVAAVEADGTRTLYVVFDSNSIVR ELKEEVERTLRDLAEEVVVCTSDSHEVNPRGYNPLGQIMGRNDKRRLLKAVRCAAEGAIEDLEECEVVPVEGWVKVEVTG PGSFQRLVHSVETTRTVIGVLLPTAFLGVALLSLLFGIRT
Specific function: Unknown
COG id: COG3356
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65018; Mature: 65018
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRIPRPYTRTRPLLPPSGPSPVGTFDDHLFPRTRTLPHGSPGGTRPLARLMRLSFRLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC SLRDCVLGWILLLGISALYSPHLTVYVTLPALASFVILLLDRLAKRDVPPNRWPFVGLVY CHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AVPLVLSVPLGTVAVAVTKGVMSTFLTLALLGTVRSGVLRAVPVLAYLVIDSLALATLTG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPLPPLLLASLTGGVVGAAVVAVVDTLTLASLGIRTTDAFGEFLSFKSGRDHSLHSLFRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHC METRTRVRVPVRVFAFMTKNGDVKGCFVIPWIHPGPLGDVGGGDLPGRIVRRLLKEGIVP HHHHHEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEE LVFHSTTTHDFNPVDRREAGKIVEETVRLVREAADREGCSVGSAPVRGEETDSVGQILGD EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RLFLVLSKYPEPSDDIDAATGIALERETGGWVADCHNCFGDPDRGRVYAFSEDFWRLMRD HHHHHHHCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHH ARRISERVEPTPGLRAGFDHADPGLDPETGLGSGGVSVAAVEADGTRTLYVVFDSNSIVR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHH ELKEEVERTLRDLAEEVVVCTSDSHEVNPRGYNPLGQIMGRNDKRRLLKAVRCAAEGAIE HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH DLEECEVVPVEGWVKVEVTGPGSFQRLVHSVETTRTVIGVLLPTAFLGVALLSLLFGIRT HHHHCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRRIPRPYTRTRPLLPPSGPSPVGTFDDHLFPRTRTLPHGSPGGTRPLARLMRLSFRLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC SLRDCVLGWILLLGISALYSPHLTVYVTLPALASFVILLLDRLAKRDVPPNRWPFVGLVY CHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AVPLVLSVPLGTVAVAVTKGVMSTFLTLALLGTVRSGVLRAVPVLAYLVIDSLALATLTG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPLPPLLLASLTGGVVGAAVVAVVDTLTLASLGIRTTDAFGEFLSFKSGRDHSLHSLFRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHC METRTRVRVPVRVFAFMTKNGDVKGCFVIPWIHPGPLGDVGGGDLPGRIVRRLLKEGIVP HHHHHEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEE LVFHSTTTHDFNPVDRREAGKIVEETVRLVREAADREGCSVGSAPVRGEETDSVGQILGD EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RLFLVLSKYPEPSDDIDAATGIALERETGGWVADCHNCFGDPDRGRVYAFSEDFWRLMRD HHHHHHHCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHH ARRISERVEPTPGLRAGFDHADPGLDPETGLGSGGVSVAAVEADGTRTLYVVFDSNSIVR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHH ELKEEVERTLRDLAEEVVVCTSDSHEVNPRGYNPLGQIMGRNDKRRLLKAVRCAAEGAIE HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH DLEECEVVPVEGWVKVEVTGPGSFQRLVHSVETTRTVIGVLLPTAFLGVALLSLLFGIRT HHHHCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA