Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094330

Identifier: 20094330

GI number: 20094330

Start: 842475

End: 843281

Strand: Direct

Name: 20094330

Synonym: MK0894

Alternate gene names: NA

Gene position: 842475-843281 (Clockwise)

Preceding gene: 20094327

Following gene: 20094335

Centisome position: 49.7

GC content: 66.54

Gene sequence:

>807_bases
TTGTTCGCGTTCCTACTCGCCGGGGATAACGTTGAGTTGGCGCTAATGGAATTAAAGGGCGCGCTCCGGGCGGAGGTCGG
CGAGATCGAAGTCGAGGTCCACGATCGGGTCGCGGTGGTCGAAGGACTCACTGACGAGGAGGCGGAGCGGGTCGTCCGGC
GGCTCGCCCGGACGCATGCGGTCTACCGGGTCGGCGAGGGGAGGGTCAGGGTCGAGATTGGGGGTGAGCGTAGACCAGTC
CGGCTCCTCGCGGAGCGTGAGAAGCTGTCCGATCGTAAGCCGCACAAGCGCCCCGAGTTCATGCCCGACTCCACGGAGCC
TTTCCTGGCCCGGGTCCTGGTCAACCTGGCCGAGGCGCGGCGCGGGGAGCGCTTACTGGACCCGATGTGCAACGTGGGCG
GTATCCTCATCGAGGCGGGACTGATCGGCTGCGTGCCCGTCGGGGTGGAGGTCCGGGAGGAACTCGTGGAGCGGACCGAG
CGTAACCTGCGGCACTACAGGATCGAGGAGTACGAGCTACACACGGGTCGGGCGGAGGAGGTAGACGAGATCCTAGACGA
GCCCGTCCAGGCCGCCGCCGTGGACCCGCCATACGGCCGCTCTTCGTACATCGAGGGCGGGCCGGTGGAGCGGCTGCTAC
TCAACACGTTGGACGCGTTGTCTGAGGTGGTCGAGGGCAAGGTCTCCCTGACCGCGCCCGTGGACGCCTGGGAAGAAGTT
AAAGAGAGTGTGAAGAGGGTAGAGGGCGAGGTTCGGGACCGGGTCCACGGCAGCCTTACCCGGGTCATCGCCGTCGTCGT
GCCTTAG

Upstream 100 bases:

>100_bases
AGCGCGTCCAGCTCGAAGTGCGAGCTCTGGAGTTAGGAACTCCCCTACTCTACCGCGGATACCGGACGTACCGAAGTATT
TACCCACGGGGGGTCCCCCT

Downstream 100 bases:

>100_bases
CGGTGATGACCGCGGACCGCTCCTGATCTGTGATGAGTTTTCGGGGAGCTGATCACCGGCTCAGGTACGACAGCACCGCG
CGGATCCCGGACTTAACGAT

Product: DNA-modification methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHAVYRVGEGRVRVEIGGERRPV
RLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTE
RNLRHYRIEEYELHTGRAEEVDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV
KESVKRVEGEVRDRVHGSLTRVIAVVVP

Sequences:

>Translated_268_residues
MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHAVYRVGEGRVRVEIGGERRPV
RLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTE
RNLRHYRIEEYELHTGRAEEVDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV
KESVKRVEGEVRDRVHGSLTRVIAVVVP
>Mature_268_residues
MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHAVYRVGEGRVRVEIGGERRPV
RLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTE
RNLRHYRIEEYELHTGRAEEVDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV
KESVKRVEGEVRDRVHGSLTRVIAVVVP

Specific function: Unknown

COG id: COG1041

COG function: function code L; Predicted DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005885
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 29972; Mature: 29972

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHA
CEEEEEECCCCEEHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHH
VYRVGEGRVRVEIGGERRPVRLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEAR
HEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTERNLRHYRIEEYELHTGRAEE
CCHHHHHHHHCCCHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHH
VDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV
HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH
KESVKRVEGEVRDRVHGSLTRVIAVVVP
HHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHA
CEEEEEECCCCEEHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHH
VYRVGEGRVRVEIGGERRPVRLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEAR
HEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTERNLRHYRIEEYELHTGRAEE
CCHHHHHHHHCCCHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHH
VDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV
HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH
KESVKRVEGEVRDRVHGSLTRVIAVVVP
HHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]