Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094315
Identifier: 20094315
GI number: 20094315
Start: 830233
End: 831030
Strand: Direct
Name: 20094315
Synonym: MK0879
Alternate gene names: NA
Gene position: 830233-831030 (Clockwise)
Preceding gene: 20094314
Following gene: 20094316
Centisome position: 48.98
GC content: 59.9
Gene sequence:
>798_bases GTGGGCGAGCGGACTGTTGCGCATTACGGTCCTTACGTCGTTAAGGAGATCAGAACGAACCAGGACAACCTGGACGCGAT CCGTTCGTTACTGAAGTCCGCCGAGCGCCGTGGTCCTGGAAACGTGGGAGAAGTGGTTCCTCTCGATGTCTTCGACACGG ACCGTGGGCTAGCCTCCGATCGCACCAGGCTGCTGGTGGCTCTACGGGAGGACGAGATCGTCGCTTGCGTCGCCGCGGAT CCTCGGGAACGCATAGGTTCCGGTCCCAATCCCCACAACGTCTTCGGCCTCGTAGTGTCTCCGGAGGTGCGCGCCAGGTA CCAGTTGGGACACGTCATGATCGCCGCCGCCCTGAAAACGCTCCGGGAAGAAGGTCTGAAGGTCGCACGAACCACTCCAA TCAGACGCGCCTTACCGTTCTTCACGGGTATCCGCGCCGATCCCACTCATGTGTACCGGGAACTCGAGGTGAGGCTAAGG TGGTATCGTAGGACTGGGAGTGAGGAGTACTTGGAGCTAACCAGGGTACCGAGAGAGGTCCGTGAAGAGCTGGAGCTACT TCGAATTCGTACGGTGAACGCTCGGAGGGACCCTACACCGTTTCACCGGTTGGATCCGGAGAAGCCCGTGCACGTTTTCA GGTCGGGTGTCCGCTCGTTCACCCTCATAGCATCGCTGGGGGACGGGGATCATGGTCGACGTCAGCGTGATATTGCCCAC GTACAACGAGCGCGAGAACCTTCCAAGGGTGATTCCCAAGATCGAGGAGGTAGTGGAGGAAGAAGGCTGGACCGCTGA
Upstream 100 bases:
>100_bases GCGCGCGTACCACTGATGCGGACTCCCCGACCTTCCACCAACAATCCCCTCCCCAGGATGACGAGGCGGTTGCTGGCGGA CCCGACAGGGATGATGAATA
Downstream 100 bases:
>100_bases GATTCTGGTAGTCGACGACAACTCACCCGACGGAACGGCGGAAGTGGCCCGAGAACTTTCCAGACAGTACGGTAACATCA AGGTGATCGTGCGCGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGERTVAHYGPYVVKEIRTNQDNLDAIRSLLKSAERRGPGNVGEVVPLDVFDTDRGLASDRTRLLVALREDEIVACVAAD PRERIGSGPNPHNVFGLVVSPEVRARYQLGHVMIAAALKTLREEGLKVARTTPIRRALPFFTGIRADPTHVYRELEVRLR WYRRTGSEEYLELTRVPREVREELELLRIRTVNARRDPTPFHRLDPEKPVHVFRSGVRSFTLIASLGDGDHGRRQRDIAH VQRAREPSKGDSQDRGGSGGRRLDR
Sequences:
>Translated_265_residues MGERTVAHYGPYVVKEIRTNQDNLDAIRSLLKSAERRGPGNVGEVVPLDVFDTDRGLASDRTRLLVALREDEIVACVAAD PRERIGSGPNPHNVFGLVVSPEVRARYQLGHVMIAAALKTLREEGLKVARTTPIRRALPFFTGIRADPTHVYRELEVRLR WYRRTGSEEYLELTRVPREVREELELLRIRTVNARRDPTPFHRLDPEKPVHVFRSGVRSFTLIASLGDGDHGRRQRDIAH VQRAREPSKGDSQDRGGSGGRRLDR >Mature_264_residues GERTVAHYGPYVVKEIRTNQDNLDAIRSLLKSAERRGPGNVGEVVPLDVFDTDRGLASDRTRLLVALREDEIVACVAADP RERIGSGPNPHNVFGLVVSPEVRARYQLGHVMIAAALKTLREEGLKVARTTPIRRALPFFTGIRADPTHVYRELEVRLRW YRRTGSEEYLELTRVPREVREELELLRIRTVNARRDPTPFHRLDPEKPVHVFRSGVRSFTLIASLGDGDHGRRQRDIAHV QRAREPSKGDSQDRGGSGGRRLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30058; Mature: 29926
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERTVAHYGPYVVKEIRTNQDNLDAIRSLLKSAERRGPGNVGEVVPLDVFDTDRGLASD CCCCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC RTRLLVALREDEIVACVAADPRERIGSGPNPHNVFGLVVSPEVRARYQLGHVMIAAALKT CEEEEEEECCCCEEEEEECCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH LREEGLKVARTTPIRRALPFFTGIRADPTHVYRELEVRLRWYRRTGSEEYLELTRVPREV HHHCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH REELELLRIRTVNARRDPTPFHRLDPEKPVHVFRSGVRSFTLIASLGDGDHGRRQRDIAH HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHH VQRAREPSKGDSQDRGGSGGRRLDR HHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GERTVAHYGPYVVKEIRTNQDNLDAIRSLLKSAERRGPGNVGEVVPLDVFDTDRGLASD CCCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC RTRLLVALREDEIVACVAADPRERIGSGPNPHNVFGLVVSPEVRARYQLGHVMIAAALKT CEEEEEEECCCCEEEEEECCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH LREEGLKVARTTPIRRALPFFTGIRADPTHVYRELEVRLRWYRRTGSEEYLELTRVPREV HHHCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH REELELLRIRTVNARRDPTPFHRLDPEKPVHVFRSGVRSFTLIASLGDGDHGRRQRDIAH HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHH VQRAREPSKGDSQDRGGSGGRRLDR HHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA