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The map label for this gene is 20094292

Identifier: 20094292

GI number: 20094292

Start: 812939

End: 813283

Strand: Direct

Name: 20094292

Synonym: MK0856

Alternate gene names: NA

Gene position: 812939-813283 (Clockwise)

Preceding gene: 20094285

Following gene: 20094293

Centisome position: 47.96

GC content: 58.26

Gene sequence:

>345_bases
ATGGAGAGGACGGTTTCCATCGTCTGCATCGTCCTAGGTGCCGCGTTACTTTGGATGTCTTCCGGTGCTTCTCATCAGGT
GGTCGGGGCGAGAGAGTTGCAGTCGACCGATGACGGAACATTAGTAAGGGTCAAAGGCGAGGTGCTGCAGGTGAACGTAG
TGAGCGACGGCGCGGAAGTTGTCGTTCTAGACGCGGGGGACGGGACGGTGACCGTGTTCCTCAGTAGGGAAGCCGCAAGT
ACTTTGGCCCCGACTCCTGGGGAATCGCTGGAAGTGGTAGGAAGAGTTGAAGAGTATCGAGGGCGGAAGGAAGTCCGTGT
GGATTCGCCGGTACGTGCCCGCTAA

Upstream 100 bases:

>100_bases
CGTACGCTTGACATCCGCCGTCCGCACCGAGTTCACCCCATCGCAAACGTCGGTTGGTGGCGGTAAATAGCACGGACGTG
CGGCCCGATCTAGGGTCCCC

Downstream 100 bases:

>100_bases
GGCTCTCATCGTCGTGATCATCACGACGTTAACGGTCCCGTATTTCGTGTTCTACGGTAAGCCGCGCGGTCCCGGGTACC
CTACGGAGCTGTACGGATAC

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MERTVSIVCIVLGAALLWMSSGASHQVVGARELQSTDDGTLVRVKGEVLQVNVVSDGAEVVVLDAGDGTVTVFLSREAAS
TLAPTPGESLEVVGRVEEYRGRKEVRVDSPVRAR

Sequences:

>Translated_114_residues
MERTVSIVCIVLGAALLWMSSGASHQVVGARELQSTDDGTLVRVKGEVLQVNVVSDGAEVVVLDAGDGTVTVFLSREAAS
TLAPTPGESLEVVGRVEEYRGRKEVRVDSPVRAR
>Mature_114_residues
MERTVSIVCIVLGAALLWMSSGASHQVVGARELQSTDDGTLVRVKGEVLQVNVVSDGAEVVVLDAGDGTVTVFLSREAAS
TLAPTPGESLEVVGRVEEYRGRKEVRVDSPVRAR

Specific function: Unknown

COG id: COG4085

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12063; Mature: 12063

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTVSIVCIVLGAALLWMSSGASHQVVGARELQSTDDGTLVRVKGEVLQVNVVSDGAEV
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEEECCEEEEEEECCCCEE
VVLDAGDGTVTVFLSREAASTLAPTPGESLEVVGRVEEYRGRKEVRVDSPVRAR
EEEECCCCEEEEEEECCCCCCCCCCCCCCHHEEECHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MERTVSIVCIVLGAALLWMSSGASHQVVGARELQSTDDGTLVRVKGEVLQVNVVSDGAEV
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEEECCEEEEEEECCCCEE
VVLDAGDGTVTVFLSREAASTLAPTPGESLEVVGRVEEYRGRKEVRVDSPVRAR
EEEECCCCEEEEEEECCCCCCCCCCCCCCHHEEECHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA