Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094293
Identifier: 20094293
GI number: 20094293
Start: 813255
End: 814070
Strand: Direct
Name: 20094293
Synonym: MK0857
Alternate gene names: NA
Gene position: 813255-814070 (Clockwise)
Preceding gene: 20094292
Following gene: 20094297
Centisome position: 47.98
GC content: 56.86
Gene sequence:
>816_bases GTGTGGATTCGCCGGTACGTGCCCGCTAAGGCTCTCATCGTCGTGATCATCACGACGTTAACGGTCCCGTATTTCGTGTT CTACGGTAAGCCGCGCGGTCCCGGGTACCCTACGGAGCTGTACGGATACCGGATCGTACTGGAAGATCCGGCGCTCGCGG TAGTGGACGTGGAACCCAGACGGACCCTGCTGTTCAGACACACGCTTACGGTGTCCGATGAAGGTTGGTCCGTACATCCT GTCTTCGATATACCTCCCCTGATATTCGTGCGCGCGGAGCGCATGGATACTCTTGAAACGGTTAAGAGGAACTTGTGGGC GGTTGTACTACAGGAGGGAGCTGGACGGGTGTTCATGCCCGACGAGTTCGTTGAGGGTGGCGTTCCGGGACTCATCACAG GCATCGCCGGCCAGGCTTGGGCCTGGAAACATCTGAAATGGGCCAGAGAGTTCGGAGTTATTCACGGGCTACGTCGGTAC GCTAAGGAGGTCGGACCCGAGCGCATTTCCACTGCCATCTTAGAGGAGTATAGGAGAGCACCGTGGCGGGCGATCCTAGA TTTCTGTGACATGATGAAGAACAGTGACGTAGGGAGGTTCCTGCGCTCACGTGGGCTTTCCTTCCGGGATTTCCTCACCA GTAAAGATCCGAAACTAGTAGCGGAGGTCCTAGTCGTGTTGGACCTGGGAAGGCTCGACGAGCGAGTAGTCGATGAAAGA ATACGGTACGTGTTGGATGCGAGGGCTTACCCCATCCCCGAGTCGGAAGAAAAGATCGTGGATAAGGCGGCGCGTGAGCT GCTTCGTCATGGATGA
Upstream 100 bases:
>100_bases TTCCTCAGTAGGGAAGCCGCAAGTACTTTGGCCCCGACTCCTGGGGAATCGCTGGAAGTGGTAGGAAGAGTTGAAGAGTA TCGAGGGCGGAAGGAAGTCC
Downstream 100 bases:
>100_bases AGCTCGATCCCGAGGGCTTCACAGATCTCCTTGTACCGGTTTCGGATCGTAACTTCCGTAACTCGAGCAACCTCCGCAAT CTCCTTCTGAGTACGTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MWIRRYVPAKALIVVIITTLTVPYFVFYGKPRGPGYPTELYGYRIVLEDPALAVVDVEPRRTLLFRHTLTVSDEGWSVHP VFDIPPLIFVRAERMDTLETVKRNLWAVVLQEGAGRVFMPDEFVEGGVPGLITGIAGQAWAWKHLKWAREFGVIHGLRRY AKEVGPERISTAILEEYRRAPWRAILDFCDMMKNSDVGRFLRSRGLSFRDFLTSKDPKLVAEVLVVLDLGRLDERVVDER IRYVLDARAYPIPESEEKIVDKAARELLRHG
Sequences:
>Translated_271_residues MWIRRYVPAKALIVVIITTLTVPYFVFYGKPRGPGYPTELYGYRIVLEDPALAVVDVEPRRTLLFRHTLTVSDEGWSVHP VFDIPPLIFVRAERMDTLETVKRNLWAVVLQEGAGRVFMPDEFVEGGVPGLITGIAGQAWAWKHLKWAREFGVIHGLRRY AKEVGPERISTAILEEYRRAPWRAILDFCDMMKNSDVGRFLRSRGLSFRDFLTSKDPKLVAEVLVVLDLGRLDERVVDER IRYVLDARAYPIPESEEKIVDKAARELLRHG >Mature_271_residues MWIRRYVPAKALIVVIITTLTVPYFVFYGKPRGPGYPTELYGYRIVLEDPALAVVDVEPRRTLLFRHTLTVSDEGWSVHP VFDIPPLIFVRAERMDTLETVKRNLWAVVLQEGAGRVFMPDEFVEGGVPGLITGIAGQAWAWKHLKWAREFGVIHGLRRY AKEVGPERISTAILEEYRRAPWRAILDFCDMMKNSDVGRFLRSRGLSFRDFLTSKDPKLVAEVLVVLDLGRLDERVVDER IRYVLDARAYPIPESEEKIVDKAARELLRHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31161; Mature: 31161
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIRRYVPAKALIVVIITTLTVPYFVFYGKPRGPGYPTELYGYRIVLEDPALAVVDVEPR CCCCHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHCEEEEEEECCCEEEEECCCC RTLLFRHTLTVSDEGWSVHPVFDIPPLIFVRAERMDTLETVKRNLWAVVLQEGAGRVFMP CEEEEEEEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEECC DEFVEGGVPGLITGIAGQAWAWKHLKWAREFGVIHGLRRYAKEVGPERISTAILEEYRRA HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC PWRAILDFCDMMKNSDVGRFLRSRGLSFRDFLTSKDPKLVAEVLVVLDLGRLDERVVDER HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IRYVLDARAYPIPESEEKIVDKAARELLRHG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWIRRYVPAKALIVVIITTLTVPYFVFYGKPRGPGYPTELYGYRIVLEDPALAVVDVEPR CCCCHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHCEEEEEEECCCEEEEECCCC RTLLFRHTLTVSDEGWSVHPVFDIPPLIFVRAERMDTLETVKRNLWAVVLQEGAGRVFMP CEEEEEEEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEECC DEFVEGGVPGLITGIAGQAWAWKHLKWAREFGVIHGLRRYAKEVGPERISTAILEEYRRA HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC PWRAILDFCDMMKNSDVGRFLRSRGLSFRDFLTSKDPKLVAEVLVVLDLGRLDERVVDER HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IRYVLDARAYPIPESEEKIVDKAARELLRHG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA