Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094244

Identifier: 20094244

GI number: 20094244

Start: 768031

End: 768816

Strand: Direct

Name: 20094244

Synonym: MK0807

Alternate gene names: NA

Gene position: 768031-768816 (Clockwise)

Preceding gene: 20094241

Following gene: 20094246

Centisome position: 45.31

GC content: 63.1

Gene sequence:

>786_bases
CTGATCACGTTGACCACGGACTTCGGGCTCGGTTCTCCGTATCCGGCCCAGGTTAAAGCTGTGATTCTCAGAATCGCGGC
CCCAGGCGTCGATATCGTCGACGTAACCCACGAAGTCCCGGCACAGGACGTGGTGGCTGGTTCCTACGTGATGTCAGTCG
CGTGTCCGTGGTTTCCACCGGGGTCCGTCCACGTGGGTGTGGTGGATCCCGGAGTGGGGACCGAGCGTAGGGCCGTCCTA
CTGGAGGCGGAGCGCGGGGACTTCTTGGTGGGACCGGACAACGGCCTCCTGATACCTCTCGCCGAAGAGCTCGGTGGAAT
CGTCCGGGCCTTTCGTATCCTCGAGGACGAAGTCTCGGACTGGGAAGTCTCCGCTACCTTCCACGGACGCGACGTATTCG
CCCCAGCCGCCGCGCGAGTGGCGTCAGGTGAGAGTCCGGAGAGGTTCTGTGAACCCCTAGACCCAGAGGAACTAGTCGAG
CCACCGATCGCCGAACCTGAAGTGGACGACGGCCACGTGCGTGCCCAGGTGTGGTTCGTGGATGACTTCGGGAACATCAT
CACGAACGTCCTGTACGACGAGGTGGACCTGCCCGAGACCGTGACGATCCGCGTCTCCGGGGAATCCTTCGAGGCTAGGC
ACGTCCACACGTATGGGGAGGCGGACTCCGGTGATCTGGTTGTCCTACGGTCTTCCTCCGACCACCTGGAAATCGCGGTC
GTAGAGGGGAGCGCTGCCGAACTGCTCGGCGTCTCGACGGCCGACCGGCTCGAGATTCTCTACTGA

Upstream 100 bases:

>100_bases
AGTATACTGGGTTCATGAGGTCCGCGGACCCTGGAACCGCTGCGATCGATAGAATAAGTGCGACGATTGTGATCCGTTGC
AAGGGGAGCTCCCCTTGCGT

Downstream 100 bases:

>100_bases
CCGTGCGGAAGCGGACCGCGCGGGGTTCCCCGGTGCGGATTAATCCCGTCGCACCTCTGTTACGGCCTCGGGCTCAGCCG
CCCACGGGTTTCTGAGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPPGSVHVGVVDPGVGTERRAVL
LEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSDWEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVE
PPIAEPEVDDGHVRAQVWFVDDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV
VEGSAAELLGVSTADRLEILY

Sequences:

>Translated_261_residues
MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPPGSVHVGVVDPGVGTERRAVL
LEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSDWEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVE
PPIAEPEVDDGHVRAQVWFVDDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV
VEGSAAELLGVSTADRLEILY
>Mature_261_residues
MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPPGSVHVGVVDPGVGTERRAVL
LEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSDWEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVE
PPIAEPEVDDGHVRAQVWFVDDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV
VEGSAAELLGVSTADRLEILY

Specific function: Unknown

COG id: COG1912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002747
- InterPro:   IPR023227
- InterPro:   IPR023228 [H]

Pfam domain/function: PF01887 DUF62 [H]

EC number: NA

Molecular weight: Translated: 28023; Mature: 28023

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPP
CEEEEECCCCCCCCHHHHEEEEEEEECCCCEEEECCCCCCHHHHHHCEEEEEEECCCCCC
GSVHVGVVDPGVGTERRAVLLEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSD
CCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCC
WEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVEPPIAEPEVDDGHVRAQVWFV
EEEEEEECCCEEECCHHHHHCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEE
DDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEE
VEGSAAELLGVSTADRLEILY
EECCCHHEEECCCCCCEEEEC
>Mature Secondary Structure
MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPP
CEEEEECCCCCCCCHHHHEEEEEEEECCCCEEEECCCCCCHHHHHHCEEEEEEECCCCCC
GSVHVGVVDPGVGTERRAVLLEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSD
CCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCC
WEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVEPPIAEPEVDDGHVRAQVWFV
EEEEEEECCCEEECCHHHHHCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEE
DDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEE
VEGSAAELLGVSTADRLEILY
EECCCHHEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]