Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094185

Identifier: 20094185

GI number: 20094185

Start: 709231

End: 709587

Strand: Direct

Name: 20094185

Synonym: MK0748

Alternate gene names: NA

Gene position: 709231-709587 (Clockwise)

Preceding gene: 20094184

Following gene: 20094197

Centisome position: 41.84

GC content: 54.62

Gene sequence:

>357_bases
TTGGGTGAGGAGACTGGCGGTGACTATCACGTCGTGCTCGAGGCCGCGTGGATCGTGTACAACGTCGACGACGAGGACGA
CGCTATCAACATCGCCATTGCCGAGGCGGGTAAGCGCTTGAACCGACACGGCCTCGATTACGTGGATATCGATGTCGGGT
TTTACGAGTGTCCTGAATGTGGTAATGAAATCGAAGGTGTGTGGATAGTAGCAGGTACAGCCCTCGTCCGACTGATTCTA
TCGATGCGAGTGTTCAACGCGGAAAGCGAGGAACACGCCATTCGCATCGCTAAGTACGAGATCGGTCAAGCGCTGGAGGA
TGTACCCTTAGGTGTCGTTGAAGTAACTCCGCTCTGA

Upstream 100 bases:

>100_bases
GCAAGCTCTAATACTGCCCGCCTCCCGACTCCGTGAAGCGGAGCGCGAATACATCCGCCGCGTCCTCCCACACATCCGAG
ATGTGCGTGGGGTCTAGCCT

Downstream 100 bases:

>100_bases
CCATTTACTTACCCCTTACGAGATGCGCCCATATTAGCGCCGAGAGCAACGTGAACGTAGCCAAGGCGAAGGAGTTCATC
GCCCTAGAGAACAGGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MGEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPECGNEIEGVWIVAGTALVRLIL
SMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL

Sequences:

>Translated_118_residues
MGEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPECGNEIEGVWIVAGTALVRLIL
SMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL
>Mature_117_residues
GEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPECGNEIEGVWIVAGTALVRLILS
MRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL

Specific function: Unknown

COG id: COG1885

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0212 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y748_METKA (Q8TXC6)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614032.1
- GeneID:   1476849
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0748
- NMPDR:   fig|190192.1.peg.745
- HOGENOM:   HBG497080
- OMA:   AHFESAF
- ProtClustDB:   PRK03922
- BioCyc:   MKAN190192:MK0748-MONOMER
- HAMAP:   MF_01223
- InterPro:   IPR007564
- PIRSF:   PIRSF016934
- ProDom:   PD020367

Pfam domain/function: PF04475 DUF555

EC number: NA

Molecular weight: Translated: 12990; Mature: 12859

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPEC
CCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEHHCHHHHHCCCCEEEEECCEEECCCC
GNEIEGVWIVAGTALVRLILSMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL
CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHEEEEEEEHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure 
GEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPEC
CCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEHHCHHHHHCCCCEEEEECCEEECCCC
GNEIEGVWIVAGTALVRLILSMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL
CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHEEEEEEEHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014