Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is ssuA [H]
Identifier: 20094039
GI number: 20094039
Start: 558753
End: 559712
Strand: Direct
Name: ssuA [H]
Synonym: MK0601
Alternate gene names: 20094039
Gene position: 558753-559712 (Clockwise)
Preceding gene: 20094037
Following gene: 20094040
Centisome position: 32.97
GC content: 61.15
Gene sequence:
>960_bases GTGAAGAAGGTGGTAGCCCTGGGCATAGTCATCGTGGCGGTCCTCGGCGGTGCGCTCGGATATTACTATTACACGACGAC GTCCAACGTGGTCCGGATCGGTTACCAACCCAGCGACCACTCCGCGGCCCTCTTCGTGGCCATGGCCAAGAAGATGTTCG AGAAGGAAGGGATCAAGGTGGAGACGTACGAGTTCAAGGCCGGACCGCCGGAGACGCAGGCGCTGGCGGCGGGTAAGATC GACGTCGCCTACATCGGGTGCGTCCCGGCGATCACGGCGTACTCCAAGGGTGTGCCGATCAAGATCGTCGCGGGAGTGAA CCAGGAGGGTTCCGCGATCGTGGTGCGTAAGGACGAGGCCGGCAAGATCAAGGACATCAAGGACCTGAAGGGCAAGCGGG TCGCGGAGCTCATGAAGGGATCCATCCAGGATTGTATGCTGAGAACCGCGCTGAAGCGGGCGGGCCTGGACCCCGATAAG GACGTGGACATCGTCGAGATGAAGACGGCCGACGCCGTGAACGCGCTCGGGGCGAAGCAGATCGACGCGTTCATCGAGCC CGAGCCGGGTCCGACGATGGCCGTCAAGAAAGGGTTCGGCGTCCGGCTAATGGACACCGGTAAGATCTGGTCCCACCACC AGTGCTGCGTGCTCGTGATGCGGAAGGACTTCATCGAGCGCCACCCGAACCTCGCCAAGAAGGTGCTCAAGGTCCACGTG ATGGCCACGAAGTACGTGCAGGAGCACCCCGACGAGGCCGCCAAGATCACGGCGAAGCAGCTAAAAGTACCCGAGGAGGT AGAGAAGGAGGCGATGCGACACGTTCGCTACTCCGTGGATCTGGACGTGGACAGCATCAAGATGTTCGCCAGGTTCCTCA AACAGCTCGGTTACATCAAGGAACTGCCGGACTGGTCCGACTTCATCGACCTGAAACTGCTCAAGGAGGTGGCCGGTTAG
Upstream 100 bases:
>100_bases ACCTTCCTGGGGCTGTGCACGTTGTGGTACACAACGGTCACGGGAATCACATGGAAACCCCCAAATAATAATACTCAAAC GGGTCGTCGGGGGCGGTCCC
Downstream 100 bases:
>100_bases TGATACGGAACGGCGACGAGCGACTCGAGACCCTGCTGAAGGTATCGGCGCCGGTCGCCGTGCTCGCGATCTGGCAGGCC GTGAGCGGACTCGGCCTGAT
Product: nitrate/sulfonate/taurine/bicarbonate ABC transporter periplasmic protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKKVVALGIVIVAVLGGALGYYYYTTTSNVVRIGYQPSDHSAALFVAMAKKMFEKEGIKVETYEFKAGPPETQALAAGKI DVAYIGCVPAITAYSKGVPIKIVAGVNQEGSAIVVRKDEAGKIKDIKDLKGKRVAELMKGSIQDCMLRTALKRAGLDPDK DVDIVEMKTADAVNALGAKQIDAFIEPEPGPTMAVKKGFGVRLMDTGKIWSHHQCCVLVMRKDFIERHPNLAKKVLKVHV MATKYVQEHPDEAAKITAKQLKVPEEVEKEAMRHVRYSVDLDVDSIKMFARFLKQLGYIKELPDWSDFIDLKLLKEVAG
Sequences:
>Translated_319_residues MKKVVALGIVIVAVLGGALGYYYYTTTSNVVRIGYQPSDHSAALFVAMAKKMFEKEGIKVETYEFKAGPPETQALAAGKI DVAYIGCVPAITAYSKGVPIKIVAGVNQEGSAIVVRKDEAGKIKDIKDLKGKRVAELMKGSIQDCMLRTALKRAGLDPDK DVDIVEMKTADAVNALGAKQIDAFIEPEPGPTMAVKKGFGVRLMDTGKIWSHHQCCVLVMRKDFIERHPNLAKKVLKVHV MATKYVQEHPDEAAKITAKQLKVPEEVEKEAMRHVRYSVDLDVDSIKMFARFLKQLGYIKELPDWSDFIDLKLLKEVAG >Mature_319_residues MKKVVALGIVIVAVLGGALGYYYYTTTSNVVRIGYQPSDHSAALFVAMAKKMFEKEGIKVETYEFKAGPPETQALAAGKI DVAYIGCVPAITAYSKGVPIKIVAGVNQEGSAIVVRKDEAGKIKDIKDLKGKRVAELMKGSIQDCMLRTALKRAGLDPDK DVDIVEMKTADAVNALGAKQIDAFIEPEPGPTMAVKKGFGVRLMDTGKIWSHHQCCVLVMRKDFIERHPNLAKKVLKVHV MATKYVQEHPDEAAKITAKQLKVPEEVEKEAMRHVRYSVDLDVDSIKMFARFLKQLGYIKELPDWSDFIDLKLLKEVAG
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=264, Percent_Identity=29.9242424242424, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87081803, Length=251, Percent_Identity=28.2868525896414, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35193; Mature: 35193
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVVALGIVIVAVLGGALGYYYYTTTSNVVRIGYQPSDHSAALFVAMAKKMFEKEGIKV CCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE ETYEFKAGPPETQALAAGKIDVAYIGCVPAITAYSKGVPIKIVAGVNQEGSAIVVRKDEA EEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCC GKIKDIKDLKGKRVAELMKGSIQDCMLRTALKRAGLDPDKDVDIVEMKTADAVNALGAKQ CCCCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCHHH IDAFIEPEPGPTMAVKKGFGVRLMDTGKIWSHHQCCVLVMRKDFIERHPNLAKKVLKVHV HHHEECCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH MATKYVQEHPDEAAKITAKQLKVPEEVEKEAMRHVRYSVDLDVDSIKMFARFLKQLGYIK HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH ELPDWSDFIDLKLLKEVAG CCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVVALGIVIVAVLGGALGYYYYTTTSNVVRIGYQPSDHSAALFVAMAKKMFEKEGIKV CCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE ETYEFKAGPPETQALAAGKIDVAYIGCVPAITAYSKGVPIKIVAGVNQEGSAIVVRKDEA EEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCC GKIKDIKDLKGKRVAELMKGSIQDCMLRTALKRAGLDPDKDVDIVEMKTADAVNALGAKQ CCCCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCHHH IDAFIEPEPGPTMAVKKGFGVRLMDTGKIWSHHQCCVLVMRKDFIERHPNLAKKVLKVHV HHHEECCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH MATKYVQEHPDEAAKITAKQLKVPEEVEKEAMRHVRYSVDLDVDSIKMFARFLKQLGYIK HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH ELPDWSDFIDLKLLKEVAG CCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]