| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is tauC [C]
Identifier: 20094040
GI number: 20094040
Start: 559712
End: 560467
Strand: Direct
Name: tauC [C]
Synonym: MK0602
Alternate gene names: 20094040
Gene position: 559712-560467 (Clockwise)
Preceding gene: 20094039
Following gene: 20094041
Centisome position: 33.02
GC content: 64.55
Gene sequence:
>756_bases GTGATACGGAACGGCGACGAGCGACTCGAGACCCTGCTGAAGGTATCGGCGCCGGTCGCCGTGCTCGCGATCTGGCAGGC CGTGAGCGGACTCGGCCTGATCAACCCGGTCCTCCTTCCCCCTCCCTCCCAGGTCTTCTCGGTGTTCGTCGAGATGCCCG GGGAGATACTGAAACACGCGCTGACCAGCCTCTACCGGGTGGCGGTCGGGTACTCGATCGCGGCGGTCGCGGGAGTCTCG CTGGGCGTCCTGATGGGAACGTACCGTACGGCCCACGCCGCGATGGACCTCCTGATCGAGATCATCCGTCCGATACCGCC GATAGCGTGGATACCGCTGGCCATCGTGTGGTTCGGGATCGGCGACCCGTCCGCGTTCTTCATCATCTTCGTGGGCTCGT TCTTCCCGATACTGATCAACACGATCTCCGGTATCAGGAGTGTCGACCGAATCTACGTCGAGGCGGCCCTCAACCTGGGC GCCGACGACACCGCGTTGATCCGGCACGTACTGGTGCCCGGGGCACTGCCCAACATCTTCACCGGTCTGCGGGTGGGACT GGGAGTCGGCTGGATGTGCGTCGTGGCGGCCGAGATGATCGCGGCGAAGTCCGGACTCGGATACATGATCATCGAGGCGC AGCGTATCCTGGCGACCGACCAGGTCATCGCGGGCATGATCACGATCGGGCTCCTGGGCCTCGTGATGGACCGTGGGTTC AGATACCTCGAGAGGAGGGCGCTCGTATGGCGGTGA
Upstream 100 bases:
>100_bases AGATGTTCGCCAGGTTCCTCAAACAGCTCGGTTACATCAAGGAACTGCCGGACTGGTCCGACTTCATCGACCTGAAACTG CTCAAGGAGGTGGCCGGTTA
Downstream 100 bases:
>100_bases TCCTGAAGGTGGAGGACCTGCACAAGAGCTACGACGACCTGAAGGTGCTGGACGGCATCACGTTCGAGGTCTCGGAAGGT GAGTTCTTCGCGATCGTAGG
Product: nitrate/sulfonate/bicarbonate ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MIRNGDERLETLLKVSAPVAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEMPGEILKHALTSLYRVAVGYSIAAVAGVS LGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGIGDPSAFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLG ADDTALIRHVLVPGALPNIFTGLRVGLGVGWMCVVAAEMIAAKSGLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGF RYLERRALVWR
Sequences:
>Translated_251_residues MIRNGDERLETLLKVSAPVAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEMPGEILKHALTSLYRVAVGYSIAAVAGVS LGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGIGDPSAFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLG ADDTALIRHVLVPGALPNIFTGLRVGLGVGWMCVVAAEMIAAKSGLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGF RYLERRALVWR >Mature_251_residues MIRNGDERLETLLKVSAPVAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEMPGEILKHALTSLYRVAVGYSIAAVAGVS LGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGIGDPSAFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLG ADDTALIRHVLVPGALPNIFTGLRVGLGVGWMCVVAAEMIAAKSGLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGF RYLERRALVWR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=249, Percent_Identity=38.1526104417671, Blast_Score=180, Evalue=8e-47, Organism=Escherichia coli, GI87081802, Length=236, Percent_Identity=38.9830508474576, Blast_Score=160, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27030; Mature: 27030
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNGDERLETLLKVSAPVAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEMPGEILKHA CCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LTSLYRVAVGYSIAAVAGVSLGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GDPSAFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLGADDTALIRHVLVPGALPNIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH TGLRVGLGVGWMCVVAAEMIAAKSGLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGF HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLERRALVWR HHHHHHHHCCC >Mature Secondary Structure MIRNGDERLETLLKVSAPVAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEMPGEILKHA CCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LTSLYRVAVGYSIAAVAGVSLGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GDPSAFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLGADDTALIRHVLVPGALPNIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH TGLRVGLGVGWMCVVAAEMIAAKSGLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGF HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLERRALVWR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]