Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094036

Identifier: 20094036

GI number: 20094036

Start: 556733

End: 557212

Strand: Direct

Name: 20094036

Synonym: MK0598

Alternate gene names: NA

Gene position: 556733-557212 (Clockwise)

Preceding gene: 20094035

Following gene: 20094037

Centisome position: 32.85

GC content: 60.42

Gene sequence:

>480_bases
ATGGATGTAATCAGAGCCATACTGGTCACACTGGCGCTGCTGTACGGGGTTGGATGGACGTCGACCGTGGTGAACTGGAC
GATCCCGCACGAGATGGTCCGGATGAGTGCGGGGATCTACCAGTCGACGGGGGCCACCACACAGCTGACGTTGAACCCGT
ACCGGGGAAGGGCGACCCTGGCGGTGGCCTACGACCCCGCCGTTCTGGTGAAGTTAGGCGACCGTGGGAAACCGGTGCGC
CTATCACCGAGCTCGCTGCGTGTCGGTAGGGTCAAGGTGAAGTCGTACGGCGACGCGGTCGTGATCCACGGTCCGTGTTC
CGTCCGTCCCTACATATCCGCACACGGTGTCCGGTACTCCTTCGACATCATCGATACACCCGGGTTCTCGGTCTACTTCA
ACAGATCCGGTTACTTGGTGCTCGTCAGCCACGGTAAGACGACGAAGATACGCGTCCTTCCGCTGATACCACTGATCTGA

Upstream 100 bases:

>100_bases
ACGGAGACACCGTACTGAGGTACGAGTTACCACAGTCCCTGTCCTACGGCTCTTACGCCGCGGCCGTACTGGGTACCCTG
GCGCTCGGGGCGATGCTACT

Downstream 100 bases:

>100_bases
GGGGTCTCAATCGTGCCTGAGCTCCCCTACGTCGCCGTCCCCAAACATATGGCGGAACGCGCTAGGAGGGTACTGTCTCG
AGAGGATCTTCTCGCCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MDVIRAILVTLALLYGVGWTSTVVNWTIPHEMVRMSAGIYQSTGATTQLTLNPYRGRATLAVAYDPAVLVKLGDRGKPVR
LSPSSLRVGRVKVKSYGDAVVIHGPCSVRPYISAHGVRYSFDIIDTPGFSVYFNRSGYLVLVSHGKTTKIRVLPLIPLI

Sequences:

>Translated_159_residues
MDVIRAILVTLALLYGVGWTSTVVNWTIPHEMVRMSAGIYQSTGATTQLTLNPYRGRATLAVAYDPAVLVKLGDRGKPVR
LSPSSLRVGRVKVKSYGDAVVIHGPCSVRPYISAHGVRYSFDIIDTPGFSVYFNRSGYLVLVSHGKTTKIRVLPLIPLI
>Mature_159_residues
MDVIRAILVTLALLYGVGWTSTVVNWTIPHEMVRMSAGIYQSTGATTQLTLNPYRGRATLAVAYDPAVLVKLGDRGKPVR
LSPSSLRVGRVKVKSYGDAVVIHGPCSVRPYISAHGVRYSFDIIDTPGFSVYFNRSGYLVLVSHGKTTKIRVLPLIPLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17371; Mature: 17371

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIRAILVTLALLYGVGWTSTVVNWTIPHEMVRMSAGIYQSTGATTQLTLNPYRGRATL
CHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCEEECCCCEEEEEECCCCCCEEE
AVAYDPAVLVKLGDRGKPVRLSPSSLRVGRVKVKSYGDAVVIHGPCSVRPYISAHGVRYS
EEEECCEEEEEECCCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCEEECCEEEE
FDIIDTPGFSVYFNRSGYLVLVSHGKTTKIRVLPLIPLI
EEEEECCCCEEEECCCCEEEEEECCCCEEEEEEEECCCC
>Mature Secondary Structure
MDVIRAILVTLALLYGVGWTSTVVNWTIPHEMVRMSAGIYQSTGATTQLTLNPYRGRATL
CHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCEEECCCCEEEEEECCCCCCEEE
AVAYDPAVLVKLGDRGKPVRLSPSSLRVGRVKVKSYGDAVVIHGPCSVRPYISAHGVRYS
EEEECCEEEEEECCCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCEEECCEEEE
FDIIDTPGFSVYFNRSGYLVLVSHGKTTKIRVLPLIPLI
EEEEECCCCEEEECCCCEEEEEECCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA