Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094035
Identifier: 20094035
GI number: 20094035
Start: 554373
End: 556742
Strand: Direct
Name: 20094035
Synonym: MK0597
Alternate gene names: NA
Gene position: 554373-556742 (Clockwise)
Preceding gene: 20094033
Following gene: 20094036
Centisome position: 32.71
GC content: 61.35
Gene sequence:
>2370_bases TTGTTCGGCGACAGTCGTTTGGTTCTGGCGTTGCTCGTGATCCTGGTGGGTGCGACGATAGCCAACGCGGGGAACCTGAT GTACCCGCTCTTAAGCAGAGACTCGCGCGCTCACGTGCTCAAGATATGGTACACATACCACATGCTTGCCGACGGTCGAT GGGACCCGTGGTGCCCGATGTGGTACTCGGGATTCCCGTACCTCACGTATTACGGTTCCTTGGGGTACCTACTCGGCGCC GCCGTGGACGCGATAGTCAAGGATCCGGTACGGACGTTCGTCGTCTGCCTGATCGTCGCCTCCGCGTTGATCGGAGTGGG AGTCTACGCGCTCGTGCGGGCTCGAGGGTACGCCCGGAAGGTAGCCGTGATCTGCGCGCTTCTGGGCCTCACCTCCGGAG GGTTCATGAAAGCGCTGAACTGGGAGGGCGTGTACCCGACGATTCTATCCCTGGGGTTCGGGTTCCTGGCTCTTTCCTGC TACGAGCGGTGGTTGCGGGGTGAGAAGCGTCACCTGGCCTACGCGACGTTACTCCTGGTGCCCGCCTGCTACTCCCATCC GCTCGGCGGTCTACTTTCCGGAGGGTTGATTCTGACCCGTGGGATCGCCGAAGCCGTGCTTCGGGAGAAGCTTCGGACCC CCAGGTTCCTGTTGCAATCCACGGCACCCGTTGCCATCGGGATCGCGATCGCGTTCTCGCACTACGCGGCGGCGATCTAC TACAAGAGGTTCCTATCGGAGCTGTGGTTATATCCACCAGGTTCCGTGGCGGGAGTTCTGAAAGACCTGACCGTGGGGGG TAAGTGGTCTACCGGACTGCTCGTAACGGTGACCGGCATCGTGGGCGTCGCTTACGAGATTCGACGTCGTACCGGGTTCG GTTTGTTCGTGTTGTTCTGGGGTATGGTCTCGATCGTGGTGACCTTCGCCTTCGTTCTCGGGTACTGGAAGTACCTCCCT CTCGGCAAGAACATGCTCGCGGAGCGTTACACGACTGTCCTCATGCCGATGCTGCTCGCAGTGACGGCGGCCCCCGTCGT TCGTCAGCTGCTCCGGTCGGTAAAAGCGGCTTGGGCGGCACCCCTCGGAGTGGCAGGGTTGCTTCTCTCCGGTAGCGTCG GAGCCCTGACGTACGTTCCTCCCGAGCCCCCACACGTCACGTCATCGGCCATGAAGTTATGGAAGTGGATGGGGGACAGC TGGCCGGACGACTCGTATACTGCCCGTTGTGATGCCGACCCTTACACGCATCTTTTCGACGCGAGCGTTCCGATTTCACC GATATACTCCGGGCACCCGACGATCATGGGGTGGTTCTCCCAAGGAGACCCGATGTTCTTCTCCCTGGCCGCCCGCTGGG AGTGGGAGCTCGGTTGGGTGTACGATCCCAACACCCTCAAAACCTCGCTCTGGGCGACCAACACCCGATACCTGCTGACG AAATCCTCGCTGCTGTCGAAGAAGTTGTCCCAGGAGCCGGGTTTCGTGTTACGGAAGAAGGCCGGTGACTACCGTGTGTT CGAGTTCTTAGGCCATGGTGGCTCCGCGTGCGTCGTCCCACATCCTATCGCGGTAGTGGATCGTCGCTTGGGCCTCAGGA CCGAGAACGCGTACTACACCACGCTCCTCAACTTCGTCGCGACTCCCGGCAACCGGTACGTGTTCGTCGACGCCACGTTC TGCGACGCGAGGAAGTTCGACAGAGTGATCGTGAGACCTCTGACGCCGGGTGACGTGGACCGGGCGGTGAAGCTGGCTCG GGAGGGTCGTAAGGTACTGCTCATCCTACCGGTCTCCGACACACGAGTTGCCCGTGCCGTTGAACGTCTCGGTGTCAGGG TGAGTCCGGCCAGTCCGCCTTCCTTCGTTCCCCTCCGGAAGTACCTACCGTCCGCGTACCGAGTGGACGGCAGATGGTGG AAGGACGTGCGCGTCGGTCACGGGCTCGTCCGTGTGTGCGGTGTGGACGTGGTATACTTCACCATGCGGTTCCACAGGCT CATCAAGGAGGTGCAAACCGAAGGATACCGCATGCCCAGGCTACCGACGGATGAGGAGCGGAAGTTCGTCAACGGGGTCT TGCGAGGGTTCGATTCCGGGAAACCCACTCAAGTTCACCTGGAGTACCGCGGCGACCCTGCTGTGATGCGGGTATGTGGT AACGGGTGGGTGTACCTGAAGGTCAAGTACTTCCCCGCGTGGCGGTCCTCCGACGGTCCCGTCTACCCTGCTTCATGTGG ACAGATGCTGGTGCGAGCCCACGGAGACACCGTACTGAGGTACGAGTTACCACAGTCCCTGTCCTACGGCTCTTACGCCG CGGCCGTACTGGGTACCCTGGCGCTCGGGGCGATGCTACTATGGATGTAA
Upstream 100 bases:
>100_bases CACGTCTCCCAAGCTTCCTACGTTCACCTTGACACGTCTGTTCACGCGGAAGACGAGAGCGTACGAGCCATGATCCGGTA GCACGGGGGAGTACCCCCAG
Downstream 100 bases:
>100_bases TCAGAGCCATACTGGTCACACTGGCGCTGCTGTACGGGGTTGGATGGACGTCGACCGTGGTGAACTGGACGATCCCGCAC GAGATGGTCCGGATGAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MFGDSRLVLALLVILVGATIANAGNLMYPLLSRDSRAHVLKIWYTYHMLADGRWDPWCPMWYSGFPYLTYYGSLGYLLGA AVDAIVKDPVRTFVVCLIVASALIGVGVYALVRARGYARKVAVICALLGLTSGGFMKALNWEGVYPTILSLGFGFLALSC YERWLRGEKRHLAYATLLLVPACYSHPLGGLLSGGLILTRGIAEAVLREKLRTPRFLLQSTAPVAIGIAIAFSHYAAAIY YKRFLSELWLYPPGSVAGVLKDLTVGGKWSTGLLVTVTGIVGVAYEIRRRTGFGLFVLFWGMVSIVVTFAFVLGYWKYLP LGKNMLAERYTTVLMPMLLAVTAAPVVRQLLRSVKAAWAAPLGVAGLLLSGSVGALTYVPPEPPHVTSSAMKLWKWMGDS WPDDSYTARCDADPYTHLFDASVPISPIYSGHPTIMGWFSQGDPMFFSLAARWEWELGWVYDPNTLKTSLWATNTRYLLT KSSLLSKKLSQEPGFVLRKKAGDYRVFEFLGHGGSACVVPHPIAVVDRRLGLRTENAYYTTLLNFVATPGNRYVFVDATF CDARKFDRVIVRPLTPGDVDRAVKLAREGRKVLLILPVSDTRVARAVERLGVRVSPASPPSFVPLRKYLPSAYRVDGRWW KDVRVGHGLVRVCGVDVVYFTMRFHRLIKEVQTEGYRMPRLPTDEERKFVNGVLRGFDSGKPTQVHLEYRGDPAVMRVCG NGWVYLKVKYFPAWRSSDGPVYPASCGQMLVRAHGDTVLRYELPQSLSYGSYAAAVLGTLALGAMLLWM
Sequences:
>Translated_789_residues MFGDSRLVLALLVILVGATIANAGNLMYPLLSRDSRAHVLKIWYTYHMLADGRWDPWCPMWYSGFPYLTYYGSLGYLLGA AVDAIVKDPVRTFVVCLIVASALIGVGVYALVRARGYARKVAVICALLGLTSGGFMKALNWEGVYPTILSLGFGFLALSC YERWLRGEKRHLAYATLLLVPACYSHPLGGLLSGGLILTRGIAEAVLREKLRTPRFLLQSTAPVAIGIAIAFSHYAAAIY YKRFLSELWLYPPGSVAGVLKDLTVGGKWSTGLLVTVTGIVGVAYEIRRRTGFGLFVLFWGMVSIVVTFAFVLGYWKYLP LGKNMLAERYTTVLMPMLLAVTAAPVVRQLLRSVKAAWAAPLGVAGLLLSGSVGALTYVPPEPPHVTSSAMKLWKWMGDS WPDDSYTARCDADPYTHLFDASVPISPIYSGHPTIMGWFSQGDPMFFSLAARWEWELGWVYDPNTLKTSLWATNTRYLLT KSSLLSKKLSQEPGFVLRKKAGDYRVFEFLGHGGSACVVPHPIAVVDRRLGLRTENAYYTTLLNFVATPGNRYVFVDATF CDARKFDRVIVRPLTPGDVDRAVKLAREGRKVLLILPVSDTRVARAVERLGVRVSPASPPSFVPLRKYLPSAYRVDGRWW KDVRVGHGLVRVCGVDVVYFTMRFHRLIKEVQTEGYRMPRLPTDEERKFVNGVLRGFDSGKPTQVHLEYRGDPAVMRVCG NGWVYLKVKYFPAWRSSDGPVYPASCGQMLVRAHGDTVLRYELPQSLSYGSYAAAVLGTLALGAMLLWM >Mature_789_residues MFGDSRLVLALLVILVGATIANAGNLMYPLLSRDSRAHVLKIWYTYHMLADGRWDPWCPMWYSGFPYLTYYGSLGYLLGA AVDAIVKDPVRTFVVCLIVASALIGVGVYALVRARGYARKVAVICALLGLTSGGFMKALNWEGVYPTILSLGFGFLALSC YERWLRGEKRHLAYATLLLVPACYSHPLGGLLSGGLILTRGIAEAVLREKLRTPRFLLQSTAPVAIGIAIAFSHYAAAIY YKRFLSELWLYPPGSVAGVLKDLTVGGKWSTGLLVTVTGIVGVAYEIRRRTGFGLFVLFWGMVSIVVTFAFVLGYWKYLP LGKNMLAERYTTVLMPMLLAVTAAPVVRQLLRSVKAAWAAPLGVAGLLLSGSVGALTYVPPEPPHVTSSAMKLWKWMGDS WPDDSYTARCDADPYTHLFDASVPISPIYSGHPTIMGWFSQGDPMFFSLAARWEWELGWVYDPNTLKTSLWATNTRYLLT KSSLLSKKLSQEPGFVLRKKAGDYRVFEFLGHGGSACVVPHPIAVVDRRLGLRTENAYYTTLLNFVATPGNRYVFVDATF CDARKFDRVIVRPLTPGDVDRAVKLAREGRKVLLILPVSDTRVARAVERLGVRVSPASPPSFVPLRKYLPSAYRVDGRWW KDVRVGHGLVRVCGVDVVYFTMRFHRLIKEVQTEGYRMPRLPTDEERKFVNGVLRGFDSGKPTQVHLEYRGDPAVMRVCG NGWVYLKVKYFPAWRSSDGPVYPASCGQMLVRAHGDTVLRYELPQSLSYGSYAAAVLGTLALGAMLLWM
Specific function: Unknown
COG id: COG5617
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87567; Mature: 87567
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGDSRLVLALLVILVGATIANAGNLMYPLLSRDSRAHVLKIWYTYHMLADGRWDPWCPM CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEEEEHHHCCCCCCCCCCC WYSGFPYLTYYGSLGYLLGAAVDAIVKDPVRTFVVCLIVASALIGVGVYALVRARGYARK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VAVICALLGLTSGGFMKALNWEGVYPTILSLGFGFLALSCYERWLRGEKRHLAYATLLLV HHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PACYSHPLGGLLSGGLILTRGIAEAVLREKLRTPRFLLQSTAPVAIGIAIAFSHYAAAIY HHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHH YKRFLSELWLYPPGSVAGVLKDLTVGGKWSTGLLVTVTGIVGVAYEIRRRTGFGLFVLFW HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH GMVSIVVTFAFVLGYWKYLPLGKNMLAERYTTVLMPMLLAVTAAPVVRQLLRSVKAAWAA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLGVAGLLLSGSVGALTYVPPEPPHVTSSAMKLWKWMGDSWPDDSYTARCDADPYTHLFD CHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCC ASVPISPIYSGHPTIMGWFSQGDPMFFSLAARWEWELGWVYDPNTLKTSLWATNTRYLLT CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEECCCEEEEE KSSLLSKKLSQEPGFVLRKKAGDYRVFEFLGHGGSACVVPHPIAVVDRRLGLRTENAYYT HHHHHHHHHCCCCCEEEEECCCCEEEHHHHCCCCCEEECCCCHHHHHHHHCCCCCCHHHH TLLNFVATPGNRYVFVDATFCDARKFDRVIVRPLTPGDVDRAVKLAREGRKVLLILPVSD HHHHHHCCCCCEEEEEEEEECCCHHCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCC TRVARAVERLGVRVSPASPPSFVPLRKYLPSAYRVDGRWWKDVRVGHGLVRVCGVDVVYF HHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCEEECCCEEHHHHHCCCHHHHHHHHHHHH TMRFHRLIKEVQTEGYRMPRLPTDEERKFVNGVLRGFDSGKPTQVHLEYRGDPAVMRVCG HHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEC NGWVYLKVKYFPAWRSSDGPVYPASCGQMLVRAHGDTVLRYELPQSLSYGSYAAAVLGTL CCEEEEEEEEEECEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHH ALGAMLLWM HHHHHHHCC >Mature Secondary Structure MFGDSRLVLALLVILVGATIANAGNLMYPLLSRDSRAHVLKIWYTYHMLADGRWDPWCPM CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEEEEHHHCCCCCCCCCCC WYSGFPYLTYYGSLGYLLGAAVDAIVKDPVRTFVVCLIVASALIGVGVYALVRARGYARK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VAVICALLGLTSGGFMKALNWEGVYPTILSLGFGFLALSCYERWLRGEKRHLAYATLLLV HHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PACYSHPLGGLLSGGLILTRGIAEAVLREKLRTPRFLLQSTAPVAIGIAIAFSHYAAAIY HHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHH YKRFLSELWLYPPGSVAGVLKDLTVGGKWSTGLLVTVTGIVGVAYEIRRRTGFGLFVLFW HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH GMVSIVVTFAFVLGYWKYLPLGKNMLAERYTTVLMPMLLAVTAAPVVRQLLRSVKAAWAA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLGVAGLLLSGSVGALTYVPPEPPHVTSSAMKLWKWMGDSWPDDSYTARCDADPYTHLFD CHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCC ASVPISPIYSGHPTIMGWFSQGDPMFFSLAARWEWELGWVYDPNTLKTSLWATNTRYLLT CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEECCCEEEEE KSSLLSKKLSQEPGFVLRKKAGDYRVFEFLGHGGSACVVPHPIAVVDRRLGLRTENAYYT HHHHHHHHHCCCCCEEEEECCCCEEEHHHHCCCCCEEECCCCHHHHHHHHCCCCCCHHHH TLLNFVATPGNRYVFVDATFCDARKFDRVIVRPLTPGDVDRAVKLAREGRKVLLILPVSD HHHHHHCCCCCEEEEEEEEECCCHHCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCC TRVARAVERLGVRVSPASPPSFVPLRKYLPSAYRVDGRWWKDVRVGHGLVRVCGVDVVYF HHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCEEECCCEEHHHHHCCCHHHHHHHHHHHH TMRFHRLIKEVQTEGYRMPRLPTDEERKFVNGVLRGFDSGKPTQVHLEYRGDPAVMRVCG HHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEC NGWVYLKVKYFPAWRSSDGPVYPASCGQMLVRAHGDTVLRYELPQSLSYGSYAAAVLGTL CCEEEEEEEEEECEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHH ALGAMLLWM HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA