Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094028

Identifier: 20094028

GI number: 20094028

Start: 549121

End: 549732

Strand: Direct

Name: 20094028

Synonym: MK0590

Alternate gene names: NA

Gene position: 549121-549732 (Clockwise)

Preceding gene: 20094027

Following gene: 20094029

Centisome position: 32.4

GC content: 60.46

Gene sequence:

>612_bases
GTGAGCTCGTTCAAACGACTGCTTTACCTGGACGTGATCTCCCGAAGTCACGCGGATTTCGCCAAGAGGGTGATCAGGAG
GTTAGAGCCCAAGGTCAAGGTGAGGGTGGAGTGTCTCTCGAAGTACGAGCGGGAGGACGACGCGCTGACGTACGACGGTC
GGCTCAAGGACGAGGAACCCTGGAAGGAGTTCTTACGGCGGCTGGGACGTGAGAGTTCCGACACCGTGGTAGCTACCGCG
CTGAACGTACCCCCCGACGTGCCGGATATATCTCCGAACCCGACCGTGGTTATAGGAGTGAACACGGGCGATCATCCCAA
GACGTTGGAAGTCGCGGGTCTTGCGGACGTGGTTGTTGTCGGTCGTCGCCTATACTCACCGAGCACCGGCCCTCGTGAGT
TCGGCCGCGTACGCTCGGGGAGGCTCAGGAACGGTACGGTGATCGTGGACGTCGAGGACCTCGGCCTACGGTACGCCAGC
AAGGCGGTACCCGTAATCGCGGTTCTAGTGGCGGAAAACGGTGTTGACGGGTTGATCCGGGATCTCAGGCGTAACCGCGT
AAGGACCCTGACGGAGGAAGTCCTCCGGGATCTATCGCTCTCCCAGGTATAA

Upstream 100 bases:

>100_bases
GTGGGTAAGGAACCGATGATACGCGTGCTCGGAAAGAGTGCCGTGGAGGCCGTGACTAAGCTGAGAATGTTGTTGGGATG
TGTTGTTGGGGTGTAAGGGA

Downstream 100 bases:

>100_bases
GGTGACGCCAATGAAAAACAACACTGACGACACTCATATTGTCCATCCTAAGCCACCCTACCTACCTCACACTAACATGA
GCTAGTTCAACTCGACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSSFKRLLYLDVISRSHADFAKRVIRRLEPKVKVRVECLSKYEREDDALTYDGRLKDEEPWKEFLRRLGRESSDTVVATA
LNVPPDVPDISPNPTVVIGVNTGDHPKTLEVAGLADVVVVGRRLYSPSTGPREFGRVRSGRLRNGTVIVDVEDLGLRYAS
KAVPVIAVLVAENGVDGLIRDLRRNRVRTLTEEVLRDLSLSQV

Sequences:

>Translated_203_residues
MSSFKRLLYLDVISRSHADFAKRVIRRLEPKVKVRVECLSKYEREDDALTYDGRLKDEEPWKEFLRRLGRESSDTVVATA
LNVPPDVPDISPNPTVVIGVNTGDHPKTLEVAGLADVVVVGRRLYSPSTGPREFGRVRSGRLRNGTVIVDVEDLGLRYAS
KAVPVIAVLVAENGVDGLIRDLRRNRVRTLTEEVLRDLSLSQV
>Mature_202_residues
SSFKRLLYLDVISRSHADFAKRVIRRLEPKVKVRVECLSKYEREDDALTYDGRLKDEEPWKEFLRRLGRESSDTVVATAL
NVPPDVPDISPNPTVVIGVNTGDHPKTLEVAGLADVVVVGRRLYSPSTGPREFGRVRSGRLRNGTVIVDVEDLGLRYASK
AVPVIAVLVAENGVDGLIRDLRRNRVRTLTEEVLRDLSLSQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22729; Mature: 22598

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFKRLLYLDVISRSHADFAKRVIRRLEPKVKVRVECLSKYEREDDALTYDGRLKDEEP
CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHH
WKEFLRRLGRESSDTVVATALNVPPDVPDISPNPTVVIGVNTGDHPKTLEVAGLADVVVV
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHH
GRRLYSPSTGPREFGRVRSGRLRNGTVIVDVEDLGLRYASKAVPVIAVLVAENGVDGLIR
HHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHEEEEEECCCCHHHHHH
DLRRNRVRTLTEEVLRDLSLSQV
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSFKRLLYLDVISRSHADFAKRVIRRLEPKVKVRVECLSKYEREDDALTYDGRLKDEEP
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHH
WKEFLRRLGRESSDTVVATALNVPPDVPDISPNPTVVIGVNTGDHPKTLEVAGLADVVVV
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHH
GRRLYSPSTGPREFGRVRSGRLRNGTVIVDVEDLGLRYASKAVPVIAVLVAENGVDGLIR
HHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHEEEEEECCCCHHHHHH
DLRRNRVRTLTEEVLRDLSLSQV
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA