Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094029
Identifier: 20094029
GI number: 20094029
Start: 549969
End: 550763
Strand: Direct
Name: 20094029
Synonym: MK0591
Alternate gene names: NA
Gene position: 549969-550763 (Clockwise)
Preceding gene: 20094028
Following gene: 20094030
Centisome position: 32.45
GC content: 55.97
Gene sequence:
>795_bases GTGAGCAAAGCGCAAATACTAGTTGTCCTTGCGATGCTGTCCGTAGGACTACAATCGGTATCAGCGGCACCAATTGAAGG ACAGTTCGTCGAGGAGAATGACTACCAGTGGTCGGTTCAGGTGACCCACTGCGAGCCCACCATCGACATGACCAAGTACC CGGTGATCGTGGGCGAAAAGGCCGTCTATCTGGTGCTGTTAGATGAGAGGGACGTTCAGAAAGGAGGGGGTCTCTGTGAC TACCAGCCGGCCCTGATGCCGGTACCCAAAGATTACGTGGAGATTTCCGGGAACAAGCTGTCGTTCAAAGTCAACCTGGA GGGTCAGAAGCTCCCGTTCTACTGCATGTACTTGGGTGTAGATTTCCCCGACAAGCTGGTGATGGTGACCATCGAGGAGC TGGCTAAGCACAGCGTGAGGTACGATTGGGGCTACATTAGCGAGCCGAAACCGCTGACGCTGAGCTTCCTGAGGAAGATC GTCGAGGCGTTCGAGTCCCAAGTCGACAACCCATTCCCGCACAGTGCCTTCAAGAACGAGGCCGTTTGGAATGCCGTTAG GGACACGCCGTACATCATCAGCGGACCGGTGCACGTGTCGGCCGTCGACTACGGAACTGATTACGTGGAACTGGAGATCG AGATCCCGGTGAGAACTGATGTCACCGAGTTGACAGGAACGATCGAGGTGAAGTCCGGTGAGAGTACGCAGACTCTGAGC GTAACCGGCTCCGACGTGGTCAACGGCGTCATCAAGAAGCGCGAGTATCGCAGGCCTCGGATACCGTGGAAGTGA
Upstream 100 bases:
>100_bases TATCTCACCCGAAAACTATTTATACAAGCAATTAGTGGTCCCACGTGAGACAAACACTGGGCCACAAGGTAAACAACATG TCCCCATGGGAGAGACATGC
Downstream 100 bases:
>100_bases CCATCCAACTGAGCGGTGTCGTCGAGGGGCAGCAGGTTACCGACGTTTACCCCGTGACGATCACCGTCCAGCTGGTGAAA CTCAACAGCTCGGTCAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSKAQILVVLAMLSVGLQSVSAAPIEGQFVEENDYQWSVQVTHCEPTIDMTKYPVIVGEKAVYLVLLDERDVQKGGGLCD YQPALMPVPKDYVEISGNKLSFKVNLEGQKLPFYCMYLGVDFPDKLVMVTIEELAKHSVRYDWGYISEPKPLTLSFLRKI VEAFESQVDNPFPHSAFKNEAVWNAVRDTPYIISGPVHVSAVDYGTDYVELEIEIPVRTDVTELTGTIEVKSGESTQTLS VTGSDVVNGVIKKREYRRPRIPWK
Sequences:
>Translated_264_residues MSKAQILVVLAMLSVGLQSVSAAPIEGQFVEENDYQWSVQVTHCEPTIDMTKYPVIVGEKAVYLVLLDERDVQKGGGLCD YQPALMPVPKDYVEISGNKLSFKVNLEGQKLPFYCMYLGVDFPDKLVMVTIEELAKHSVRYDWGYISEPKPLTLSFLRKI VEAFESQVDNPFPHSAFKNEAVWNAVRDTPYIISGPVHVSAVDYGTDYVELEIEIPVRTDVTELTGTIEVKSGESTQTLS VTGSDVVNGVIKKREYRRPRIPWK >Mature_263_residues SKAQILVVLAMLSVGLQSVSAAPIEGQFVEENDYQWSVQVTHCEPTIDMTKYPVIVGEKAVYLVLLDERDVQKGGGLCDY QPALMPVPKDYVEISGNKLSFKVNLEGQKLPFYCMYLGVDFPDKLVMVTIEELAKHSVRYDWGYISEPKPLTLSFLRKIV EAFESQVDNPFPHSAFKNEAVWNAVRDTPYIISGPVHVSAVDYGTDYVELEIEIPVRTDVTELTGTIEVKSGESTQTLSV TGSDVVNGVIKKREYRRPRIPWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29653; Mature: 29522
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAQILVVLAMLSVGLQSVSAAPIEGQFVEENDYQWSVQVTHCEPTIDMTKYPVIVGEK CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCEEECCC AVYLVLLDERDVQKGGGLCDYQPALMPVPKDYVEISGNKLSFKVNLEGQKLPFYCMYLGV EEEEEEECCCCHHHCCCCCCCCCCCCCCCHHHEEECCCEEEEEEEECCCCCCEEEEEEEC DFPDKLVMVTIEELAKHSVRYDWGYISEPKPLTLSFLRKIVEAFESQVDNPFPHSAFKNE CCCCCEEEEEHHHHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCH AVWNAVRDTPYIISGPVHVSAVDYGTDYVELEIEIPVRTDVTELTGTIEVKSGESTQTLS HHHHHHCCCCEEEECCEEEEEEECCCCEEEEEEEECCCCCHHHCEEEEEEECCCCCEEEE VTGSDVVNGVIKKREYRRPRIPWK ECCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SKAQILVVLAMLSVGLQSVSAAPIEGQFVEENDYQWSVQVTHCEPTIDMTKYPVIVGEK CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCEEECCC AVYLVLLDERDVQKGGGLCDYQPALMPVPKDYVEISGNKLSFKVNLEGQKLPFYCMYLGV EEEEEEECCCCHHHCCCCCCCCCCCCCCCHHHEEECCCEEEEEEEECCCCCCEEEEEEEC DFPDKLVMVTIEELAKHSVRYDWGYISEPKPLTLSFLRKIVEAFESQVDNPFPHSAFKNE CCCCCEEEEEHHHHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCH AVWNAVRDTPYIISGPVHVSAVDYGTDYVELEIEIPVRTDVTELTGTIEVKSGESTQTLS HHHHHHCCCCEEEECCEEEEEEECCCCEEEEEEEECCCCCHHHCEEEEEEECCCCCEEEE VTGSDVVNGVIKKREYRRPRIPWK ECCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA