Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094023

Identifier: 20094023

GI number: 20094023

Start: 543481

End: 544767

Strand: Direct

Name: 20094023

Synonym: MK0585

Alternate gene names: NA

Gene position: 543481-544767 (Clockwise)

Preceding gene: 20094021

Following gene: 20094024

Centisome position: 32.06

GC content: 58.66

Gene sequence:

>1287_bases
ATGAGCCGCGGCACCAAGGCCGGCATCTACCGAGATGTACTCGTTATTGAAGTTTTCCCCGGGGCGGTCCCCGACACGGG
GACGCTCCGAGCCCTGAACGAGAGGGAGCGTAGGTTACTCCTAGCGGCAGCTGGATACGATGTCACTGAGTTCTGGGCTA
GAAGTTTCATAGGACTGCTCTTCGACCATCCTACGCCCCTCGTTAGGGCATCCGAGAGACACGAGAAACTGTTACCGGAG
GCGACGGTGGCGGCAGTCCGCGAGTTGTGCGATCGTATCGAACCCGAGAAGTTACGGAAGATCCGTAGCCGTGTGGCCTC
CGGGGAGACCCCGAGGGAGGCCGTGCGTCGTGTCCTCGGATCCAAGATGGCCGGAGCCGTTTCCAGACTACTCGGTCGTG
TTATGGGTTACGTACAGTCCGACCCGCTCTCCGTGGCCATCACCCTCCAGGTGTTAGGCACCATGATCGCAGCGGACAAA
CGCCTAGAGGACGTGTCGACGGTTTTGGTCGTCGTCCCGGGCCTAGAGCACGTGCACATCGACGTATATCGACTGGCACG
AAGGGTTTACTCTAACCTCGTGAGGGCGATGAAGTCCCTCAGACGCTACCTCAACCCTCGAGTTAGGGTGCGGGTGTACG
TAGCCACGGGAGGTAAACTGGAACATCCAGCGGGAGATTCCCCCGAGGAGGAGCTGATCGAGGCGTACGAGGAGCTCTCA
AGGAGGCCCACCGTGAGACGCTTCTTCCCGGAGCGTGGCCACTTCACCGAGGTACCTTGGGACCGAGCACTCGCTGAGTT
TTTTGTGCGAGTTATCCGAAGGGAGCTCCACCGTAGGTCTCTGAAGGTAGTTCGGGCTGCGAAGCGGGAGGGTGCTTCGG
GTAGAGAGCTGTCTGAAGTGTACGGCAGGGAGTACGGTAAGTGGTTGAGCAGGTGGTTCAAACGCGGTCGTCGATGGCTG
AACTTTCACAGACCTAGTCCGGCACTCTCCGATATCTCCTGCTGCTTCGTAGCGTCAGAGGCGGGAGTAGAAGGATACCA
TGAGGAGTTCTTGATAAAGGTACTCCAGAAGGTGTTGAGAGAAGTCGTCGAACGCAGGGTGACAGGACGACGGCTTGTGC
GAAAAATAGTCAGGAAGATCGCCAGGGTCCTAAAGGAGGACTTCAGGGTCGAAGGGAAGATACGCGAAGGGATTCTCCAC
ATGGCGAGGCTACTCGGTGGCAGACGCAAAGCCGCGTTAGGTGGCAAGACACTGCTCGAAGCGTTCGGGGCACCTCCACC
GAGTTGA

Upstream 100 bases:

>100_bases
CCGGTCGAGTTCATGGTCAGATCAACGCTCGCACAAATGAGAATGATTGGAAAGAGAGGGGGCGGGAAGGGAGGCTCCCA
CCGGTCGGGGGTCAAGGCCC

Downstream 100 bases:

>100_bases
GGGTATCTTCGGACGGTAACCCCACGATCGTGAGCGGCGGAGGTGCCGACAATTGTTACGATTTCAATAACATTTGAATA
TCGCAACGAAAATTCTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLLFDHPTPLVRASERHEKLLPE
ATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLGSKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADK
RLEDVSTVLVVVPGLEHVHIDVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS
RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEVYGREYGKWLSRWFKRGRRWL
NFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLREVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILH
MARLLGGRRKAALGGKTLLEAFGAPPPS

Sequences:

>Translated_428_residues
MSRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLLFDHPTPLVRASERHEKLLPE
ATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLGSKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADK
RLEDVSTVLVVVPGLEHVHIDVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS
RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEVYGREYGKWLSRWFKRGRRWL
NFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLREVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILH
MARLLGGRRKAALGGKTLLEAFGAPPPS
>Mature_427_residues
SRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLLFDHPTPLVRASERHEKLLPEA
TVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLGSKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADKR
LEDVSTVLVVVPGLEHVHIDVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELSR
RPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEVYGREYGKWLSRWFKRGRRWLN
FHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLREVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILHM
ARLLGGRRKAALGGKTLLEAFGAPPPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48746; Mature: 48614

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLL
CCCCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHHHEEEEHCCCCCHHHHHHHHHHHHH
FDHPTPLVRASERHEKLLPEATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLG
HCCCCCHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
SKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADKRLEDVSTVLVVVPGLEHVHI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH
DVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEV
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YGREYGKWLSRWFKRGRRWLNFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
EVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILHMARLLGGRRKAALGGKTLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHH
AFGAPPPS
HHCCCCCC
>Mature Secondary Structure 
SRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLL
CCCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHHHEEEEHCCCCCHHHHHHHHHHHHH
FDHPTPLVRASERHEKLLPEATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLG
HCCCCCHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
SKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADKRLEDVSTVLVVVPGLEHVHI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH
DVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEV
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YGREYGKWLSRWFKRGRRWLNFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
EVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILHMARLLGGRRKAALGGKTLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHH
AFGAPPPS
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA