Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094017

Identifier: 20094017

GI number: 20094017

Start: 538169

End: 538615

Strand: Direct

Name: 20094017

Synonym: MK0579

Alternate gene names: NA

Gene position: 538169-538615 (Clockwise)

Preceding gene: 20094015

Following gene: 20094018

Centisome position: 31.75

GC content: 58.17

Gene sequence:

>447_bases
GTGTTAGTATTGGCCCGGGTGTTCATTCACCCGCCTAACAGTCTGATTCTCCACGATCTGGTCGAGAGGTTCGGGCACGA
GCCACTCTCACTGCCGAAAGAGATAAGCAAACGAGTGCGAGACCCAGAGATCGACTCACCCCCGATGAACGTAACCCCTC
AGGACGCGAAGCGAGGTCTGAAGTACGCGGCCGTGGAGGTCCCTTCGGGTGTCAGGGGCAGGCTGGCCCTGATCGGTCCA
CTCATAGAGAAGGCCGACGCCGCCATCGTAGTCACAGGCATCGAGGACTTCTCCTTCGGCTGCCTAGGCTGCGACAGAAC
GAACGAGTTCGTGACGTACCTAGTTCGACGCCAAGGCATACCGGTGCTGGAGCTGGAGTACCCGAAATCGGAGGAAGAAG
CGAAAGCGTTCGTCCGTGAAATCCGAGACTTCTTGGAGTCGTTGTAG

Upstream 100 bases:

>100_bases
ACACACCTCCCGCCAGCACGCGCTTACCCACGTGAACGCTCCCCCGAGTGTGACCGAAGTTTGATTAACCCCGAACTACC
GGGTGTCTTGACGGCGCGGG

Downstream 100 bases:

>100_bases
GGGTGGTCCCGTTTGGCCGTCCAGATCGCTCAGCTCTCGTGTGGCACGGAGTATAGCGGTGTCCAACCCGAGATAGAGCG
TGCGGCCGAACGAGTCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGLKYAAVEVPSGVRGRLALIGP
LIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGIPVLELEYPKSEEEAKAFVREIRDFLESL

Sequences:

>Translated_148_residues
MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGLKYAAVEVPSGVRGRLALIGP
LIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGIPVLELEYPKSEEEAKAFVREIRDFLESL
>Mature_148_residues
MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGLKYAAVEVPSGVRGRLALIGP
LIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGIPVLELEYPKSEEEAKAFVREIRDFLESL

Specific function: Unknown

COG id: COG4050

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012356 [H]

Pfam domain/function: PF09885 DUF2112 [H]

EC number: NA

Molecular weight: Translated: 16579; Mature: 16579

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGL
CEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCC
KYAAVEVPSGVRGRLALIGPLIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGI
EEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHCCC
PVLELEYPKSEEEAKAFVREIRDFLESL
CEEEEECCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGL
CEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCC
KYAAVEVPSGVRGRLALIGPLIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGI
EEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHCCC
PVLELEYPKSEEEAKAFVREIRDFLESL
CEEEEECCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]