Click here to switch to the map view.

The map label for this gene is cooS

Identifier: 20093974

GI number: 20093974

Start: 499901

End: 501817

Strand: Direct

Name: cooS

Synonym: MK0536

Alternate gene names: 20093974

Gene position: 499901-501817 (Clockwise)

Preceding gene: 20093972

Following gene: 20093975

Centisome position: 29.49

GC content: 61.66

Gene sequence:

>1917_bases
GTGGAGGAAAAGAGATCCTCGTGCCCGTACGCCGATGAAGCCGTGTGTGAGCTAGTCGAGCACGCGAAGGAGCTGAATGA
GGAGATTCCGGAGATAGAGACCCCGCACATCCGATGGCCCGTTCAGTTCCCGAAGTGCCCGTACGGCAAGCAAGGCGTCT
GGTGTAACATCTGCTCGAACGGCCCGTGCCGAATTACGGAGAAGACACCACGCGGTGTCTGCGGAGCGACGGCGGACGTG
ATCGTGGCACGCAACTTCTTGCGTCACGTCGCCGCCGGAGCCGCGTGCTACGTGCACTGCCTGGAGAACGCCGCCCGGGC
CCTCAAGTCCGTGGCGGACGAGGAATCTCCTTACGAGATCGCAGACGAGAAGGCGCTGAGGCACGCTGCCGAAGTATACG
GTCTAGATACCTCCGGTAAACCGGAAGATGTGGCCGAGGAGATCGCAGAGTTCATTCTCGAGGATATCTACAGGCCCAGA
TATGAGGAGTCCGAGGTGTTCAAGGCTGTTGTACCCGATTGGCGCATCGAGATGTACGAGGAAATGGGCCTAATTCCGGG
CGGAGCTAAGTCGGAGATACACGACGCCCTTGTCAAGACGAGTACGAACCTCAACTCAGACCCCGTTGACATGCTCCTCC
ACGTGCTGCGACTGGGACTGATCACCGGCCCTGTCGCGCTCTTCGGTGTGGAGACGATCAACGATATCCTCTTCGGCAGC
CCGAAGATCACGCAAACGGAGGGTGGTCCCGGAATACTGGACCCGGACTACGTCAACATCATGACGACCGGCCACCAGAT
GGCTCTCATGAAGTACCTGACGGACGCCGCCGAGAAGCTGGAAGAAGAGGCCAAGGCGGCGGGAGCTAAAGGTATCCGGA
TCATCGGTGCGACGTGCGTCGGCGACGATTTCGAGGCGCGCGCCGAGCACCTACCAGACACGTACGCGGGCTTCGCGGGT
AACAATTTCGCGACGGAGGCGCTCGCAGCAACGGGTCTCGTGGACGCGATCGTGAGCGAGTTCAACTGCACGTTCCCGGG
TCTGAAGTTCTACAAGGAGAAGCTGGACGTCGAGCTGGTCGCCGTCGACGACGTGGCCAAGGTGTGGGGCGCGGAGCTGA
TCCTCTGGGACCCGGAGCGTGCCGAGGAGGTCGCGGAGGAGGCCGTCCAGAGGGCCATTGAGGCGTTCAAGGAGCGCCGG
TCGAAGCACGAGGACAAGATCATGGAGCCGAAGCACAGGCACGAGAACGTGGTGGGGTTCGGATACTTCTCGATCGAGGA
GGCCGTCGGCTGGGAGAACGTGCTCAAGCTGATCGAAGAAGGCACCATCCGCGGCGTGTGCGCCATCATGGGCTGCACGA
ATCTCTCCAGCGGCGGCCACAACGTGCCGGCGGTCGAGCTCGCCAAGGAGATGATCAAGCGCGACGTGCTCGTGCTCGGC
GCCGGCTGTGTGAACGGGGCGTTCGCCAACGCTGGACTGTTCAACCCTGAAGCAGCCGAGCTGGCCGGTGACAACCTCCG
ACAGGTGTGCGAGGAGTTAGGTATTCCACCGGTGCTGCATTACGGCCCATGTCTGGCGATCGGTAAGATCGAGCATCTCG
TCTTCGAGATCGCCGAGATACTTCGAGAGAAAACCGGCGAGGAAATCGACATCCCGGACGTACCCGCCGTCGCGAGCGCG
CCGCAGTGGCTCGAGGAGCAAGCCCTAGCGGACGCGTCCTCGGCCTTAGCTCTAGGTATCACGCTGCACGTGAGTCCCGT
ACCGCCGGTGACCGGTAGCGAGCTGGTTACGAAGACGCTGCTGGAGGACCTACCGGATCTCACCGGCGGCGAGCTGATCG
TGGAGACGGACATGAAGCGTGCCGGAGAGATTCTCGCCGAGAAGATCGAGGAGAAGCGGAAACGGCTTGGTATCTAA

Upstream 100 bases:

>100_bases
CCAAACGTTTGATGAAAATCGAAACTAATATAAGTCAAGTCACCCCTCCAATGGTCGGATAGTATCGAACGTTCCCATAG
TACCGAACAAGGGGATCCCC

Downstream 100 bases:

>100_bases
TTCTCACCCCCACTTCCGGGATGGTGGTGACCATGGAGATCGAGGCGATCCGTGTAGCAACGGGAGCTCCTGGCGAACTG
TATATGGTAGCCGAGATCGC

Product: 6Fe-6S prismane cluster-containing protein

Products: NA

Alternate protein names: CODH

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MEEKRSSCPYADEAVCELVEHAKELNEEIPEIETPHIRWPVQFPKCPYGKQGVWCNICSNGPCRITEKTPRGVCGATADV
IVARNFLRHVAAGAACYVHCLENAARALKSVADEESPYEIADEKALRHAAEVYGLDTSGKPEDVAEEIAEFILEDIYRPR
YEESEVFKAVVPDWRIEMYEEMGLIPGGAKSEIHDALVKTSTNLNSDPVDMLLHVLRLGLITGPVALFGVETINDILFGS
PKITQTEGGPGILDPDYVNIMTTGHQMALMKYLTDAAEKLEEEAKAAGAKGIRIIGATCVGDDFEARAEHLPDTYAGFAG
NNFATEALAATGLVDAIVSEFNCTFPGLKFYKEKLDVELVAVDDVAKVWGAELILWDPERAEEVAEEAVQRAIEAFKERR
SKHEDKIMEPKHRHENVVGFGYFSIEEAVGWENVLKLIEEGTIRGVCAIMGCTNLSSGGHNVPAVELAKEMIKRDVLVLG
AGCVNGAFANAGLFNPEAAELAGDNLRQVCEELGIPPVLHYGPCLAIGKIEHLVFEIAEILREKTGEEIDIPDVPAVASA
PQWLEEQALADASSALALGITLHVSPVPPVTGSELVTKTLLEDLPDLTGGELIVETDMKRAGEILAEKIEEKRKRLGI

Sequences:

>Translated_638_residues
MEEKRSSCPYADEAVCELVEHAKELNEEIPEIETPHIRWPVQFPKCPYGKQGVWCNICSNGPCRITEKTPRGVCGATADV
IVARNFLRHVAAGAACYVHCLENAARALKSVADEESPYEIADEKALRHAAEVYGLDTSGKPEDVAEEIAEFILEDIYRPR
YEESEVFKAVVPDWRIEMYEEMGLIPGGAKSEIHDALVKTSTNLNSDPVDMLLHVLRLGLITGPVALFGVETINDILFGS
PKITQTEGGPGILDPDYVNIMTTGHQMALMKYLTDAAEKLEEEAKAAGAKGIRIIGATCVGDDFEARAEHLPDTYAGFAG
NNFATEALAATGLVDAIVSEFNCTFPGLKFYKEKLDVELVAVDDVAKVWGAELILWDPERAEEVAEEAVQRAIEAFKERR
SKHEDKIMEPKHRHENVVGFGYFSIEEAVGWENVLKLIEEGTIRGVCAIMGCTNLSSGGHNVPAVELAKEMIKRDVLVLG
AGCVNGAFANAGLFNPEAAELAGDNLRQVCEELGIPPVLHYGPCLAIGKIEHLVFEIAEILREKTGEEIDIPDVPAVASA
PQWLEEQALADASSALALGITLHVSPVPPVTGSELVTKTLLEDLPDLTGGELIVETDMKRAGEILAEKIEEKRKRLGI
>Mature_638_residues
MEEKRSSCPYADEAVCELVEHAKELNEEIPEIETPHIRWPVQFPKCPYGKQGVWCNICSNGPCRITEKTPRGVCGATADV
IVARNFLRHVAAGAACYVHCLENAARALKSVADEESPYEIADEKALRHAAEVYGLDTSGKPEDVAEEIAEFILEDIYRPR
YEESEVFKAVVPDWRIEMYEEMGLIPGGAKSEIHDALVKTSTNLNSDPVDMLLHVLRLGLITGPVALFGVETINDILFGS
PKITQTEGGPGILDPDYVNIMTTGHQMALMKYLTDAAEKLEEEAKAAGAKGIRIIGATCVGDDFEARAEHLPDTYAGFAG
NNFATEALAATGLVDAIVSEFNCTFPGLKFYKEKLDVELVAVDDVAKVWGAELILWDPERAEEVAEEAVQRAIEAFKERR
SKHEDKIMEPKHRHENVVGFGYFSIEEAVGWENVLKLIEEGTIRGVCAIMGCTNLSSGGHNVPAVELAKEMIKRDVLVLG
AGCVNGAFANAGLFNPEAAELAGDNLRQVCEELGIPPVLHYGPCLAIGKIEHLVFEIAEILREKTGEEIDIPDVPAVASA
PQWLEEQALADASSALALGITLHVSPVPPVTGSELVTKTLLEDLPDLTGGELIVETDMKRAGEILAEKIEEKRKRLGI

Specific function: Unknown

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COOS_METKA (Q8TXX3)

Other databases:

- EMBL:   AF272857
- EMBL:   AE009439
- RefSeq:   NP_613821.1
- ProteinModelPortal:   Q8TXX3
- GeneID:   1476637
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0536
- NMPDR:   fig|190192.1.peg.534
- HOGENOM:   HBG393174
- OMA:   NVGLMSP
- ProtClustDB:   CLSK862738
- BioCyc:   MKAN190192:MK0536-MONOMER
- BRENDA:   1.2.99.2
- GO:   GO:0005737
- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099
- Gene3D:   G3DSA:1.20.1270.30
- Gene3D:   G3DSA:3.40.50.2030
- PIRSF:   PIRSF005023
- TIGRFAMs:   TIGR01702

Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like

EC number: =1.2.99.2

Molecular weight: Translated: 69513; Mature: 69513

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKRSSCPYADEAVCELVEHAKELNEEIPEIETPHIRWPVQFPKCPYGKQGVWCNICSN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEECCC
GPCRITEKTPRGVCGATADVIVARNFLRHVAAGAACYVHCLENAARALKSVADEESPYEI
CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ADEKALRHAAEVYGLDTSGKPEDVAEEIAEFILEDIYRPRYEESEVFKAVVPDWRIEMYE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH
EMGLIPGGAKSEIHDALVKTSTNLNSDPVDMLLHVLRLGLITGPVALFGVETINDILFGS
HCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKITQTEGGPGILDPDYVNIMTTGHQMALMKYLTDAAEKLEEEAKAAGAKGIRIIGATCV
CCCEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
GDDFEARAEHLPDTYAGFAGNNFATEALAATGLVDAIVSEFNCTFPGLKFYKEKLDVELV
CCCHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEE
AVDDVAKVWGAELILWDPERAEEVAEEAVQRAIEAFKERRSKHEDKIMEPKHRHENVVGF
EHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEE
GYFSIEEAVGWENVLKLIEEGTIRGVCAIMGCTNLSSGGHNVPAVELAKEMIKRDVLVLG
EEEHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEE
AGCVNGAFANAGLFNPEAAELAGDNLRQVCEELGIPPVLHYGPCLAIGKIEHLVFEIAEI
CCHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHH
LREKTGEEIDIPDVPAVASAPQWLEEQALADASSALALGITLHVSPVPPVTGSELVTKTL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHH
LEDLPDLTGGELIVETDMKRAGEILAEKIEEKRKRLGI
HHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEKRSSCPYADEAVCELVEHAKELNEEIPEIETPHIRWPVQFPKCPYGKQGVWCNICSN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEECCC
GPCRITEKTPRGVCGATADVIVARNFLRHVAAGAACYVHCLENAARALKSVADEESPYEI
CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ADEKALRHAAEVYGLDTSGKPEDVAEEIAEFILEDIYRPRYEESEVFKAVVPDWRIEMYE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH
EMGLIPGGAKSEIHDALVKTSTNLNSDPVDMLLHVLRLGLITGPVALFGVETINDILFGS
HCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKITQTEGGPGILDPDYVNIMTTGHQMALMKYLTDAAEKLEEEAKAAGAKGIRIIGATCV
CCCEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
GDDFEARAEHLPDTYAGFAGNNFATEALAATGLVDAIVSEFNCTFPGLKFYKEKLDVELV
CCCHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEE
AVDDVAKVWGAELILWDPERAEEVAEEAVQRAIEAFKERRSKHEDKIMEPKHRHENVVGF
EHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEE
GYFSIEEAVGWENVLKLIEEGTIRGVCAIMGCTNLSSGGHNVPAVELAKEMIKRDVLVLG
EEEHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEE
AGCVNGAFANAGLFNPEAAELAGDNLRQVCEELGIPPVLHYGPCLAIGKIEHLVFEIAEI
CCHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHH
LREKTGEEIDIPDVPAVASAPQWLEEQALADASSALALGITLHVSPVPPVTGSELVTKTL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHH
LEDLPDLTGGELIVETDMKRAGEILAEKIEEKRKRLGI
HHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014