| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is rprX [H]
Identifier: 197119995
GI number: 197119995
Start: 4157354
End: 4158493
Strand: Direct
Name: rprX [H]
Synonym: Gbem_3634
Alternate gene names: 197119995
Gene position: 4157354-4158493 (Clockwise)
Preceding gene: 197119994
Following gene: 197119996
Centisome position: 90.08
GC content: 60.0
Gene sequence:
>1140_bases ATGCTGCAACTGACCCCAAACCCGAACCAGTCCCTCCAGTTGGAGATCGAGAAGAAAACCGTGCTTATCGTCGACGACGA GGCGGTGATCCGCGACCTCTGCAAACGGGTGCTGCACGACTACGACGTCATCGAGGCGGGGGACGGGGCAGAGGCGCTGG AGATCTTCCACAAGGGGGGGGTCGACGTCATCCTCACCGACGTGATGATGCCGGAAATGGACGGGCTTGAGCTCCTGAAA AACCTGAAGGAGCGGGAGCCGACCGTGGTGGTCATCATCATGACCGGCTTCGCCGACAAGGAACTGATCCTGAAGGCGCT CAAGGCGGATGCGGACGACTTCATCACCAAGCCGCTCAACCTGCTGCAGCTAAAGAGCGCGGTCGACAAGGCGCTGGTGA AAAAGGCCCTCAAGGAAGAGATCGCGAACCTGAAGAGCGTCGACAGCTTCAAGACGCTCTTTCTCTCCATGATCTCGCAC AAGTTCCGCACCCCCATCACCTCCATCTCGCTCTTCCTGCAAAACCTCGCCTCCGGCGTGATAGACACGCGCGACGAAGG GGCCAGAGAGCACATTGGCCTCGTGTACGACGAGGCGTGCTACCTGGGCAACCTGGTGAGCGAACTCCTCGCCTTTTCCT CGTTCATGAACGGCAACAGCGATCTGCACTTGGAGCCGTGCGACCTGAAGGATCTCATCCCCTCGCTCATCAGTGACTCG AAGGAGTGGCTGACGAAACCAGGGGTCGCCCCGCAGAGCGACCTGGAAGAGGTACCCGAGCTGAGGCTCGACCGCGAGAA GATCGCCTTCGCGCTGCAGCAGGTGATCGACAACGCCATAAAGTTCTCCAAGGATACCGGACTTGTCTGCGTCACCATGA GAAACCGCGCCGGCAGTTGCCAGATCTCGGTGGAAGACAACGGCATCGGCATACCCAAGGAGCAGTTGCCCAAGATCTTC GAGAAGTTCTACCAGGTGGACGCCGATCGGACCGGGCAGGTCCGCGGCTTCGGCCTCGGCCTTTTCTACGCCCGCCTGTT CATCAGGATGCACGGCGGCAGCATCAGCATCGAAAGCGAGCTGAATGTCGGCACCCGCGTCCTCATCAGCATCCCCCACA CTACCAGTCAAAGCCCCTGA
Upstream 100 bases:
>100_bases AGGGGGAGGGTTAGGGAGGGGGAAGCGCTGCGGCCCTTTCGACCAAAGCAAACGCAGGCGACCGCCAGTTACAAAAACAA GATCATCCCGGGACATGCCG
Downstream 100 bases:
>100_bases TAGATCGTAGCATCGGCCTTTCAGTCAAACCCTCTTTGAAGTTGATTATTTCCCTCTATCTGCTATATTAACGTCTTTCA AAACGGCCATAAACTATGAA
Product: response receiver histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MLQLTPNPNQSLQLEIEKKTVLIVDDEAVIRDLCKRVLHDYDVIEAGDGAEALEIFHKGGVDVILTDVMMPEMDGLELLK NLKEREPTVVVIIMTGFADKELILKALKADADDFITKPLNLLQLKSAVDKALVKKALKEEIANLKSVDSFKTLFLSMISH KFRTPITSISLFLQNLASGVIDTRDEGAREHIGLVYDEACYLGNLVSELLAFSSFMNGNSDLHLEPCDLKDLIPSLISDS KEWLTKPGVAPQSDLEEVPELRLDREKIAFALQQVIDNAIKFSKDTGLVCVTMRNRAGSCQISVEDNGIGIPKEQLPKIF EKFYQVDADRTGQVRGFGLGLFYARLFIRMHGGSISIESELNVGTRVLISIPHTTSQSP
Sequences:
>Translated_379_residues MLQLTPNPNQSLQLEIEKKTVLIVDDEAVIRDLCKRVLHDYDVIEAGDGAEALEIFHKGGVDVILTDVMMPEMDGLELLK NLKEREPTVVVIIMTGFADKELILKALKADADDFITKPLNLLQLKSAVDKALVKKALKEEIANLKSVDSFKTLFLSMISH KFRTPITSISLFLQNLASGVIDTRDEGAREHIGLVYDEACYLGNLVSELLAFSSFMNGNSDLHLEPCDLKDLIPSLISDS KEWLTKPGVAPQSDLEEVPELRLDREKIAFALQQVIDNAIKFSKDTGLVCVTMRNRAGSCQISVEDNGIGIPKEQLPKIF EKFYQVDADRTGQVRGFGLGLFYARLFIRMHGGSISIESELNVGTRVLISIPHTTSQSP >Mature_379_residues MLQLTPNPNQSLQLEIEKKTVLIVDDEAVIRDLCKRVLHDYDVIEAGDGAEALEIFHKGGVDVILTDVMMPEMDGLELLK NLKEREPTVVVIIMTGFADKELILKALKADADDFITKPLNLLQLKSAVDKALVKKALKEEIANLKSVDSFKTLFLSMISH KFRTPITSISLFLQNLASGVIDTRDEGAREHIGLVYDEACYLGNLVSELLAFSSFMNGNSDLHLEPCDLKDLIPSLISDS KEWLTKPGVAPQSDLEEVPELRLDREKIAFALQQVIDNAIKFSKDTGLVCVTMRNRAGSCQISVEDNGIGIPKEQLPKIF EKFYQVDADRTGQVRGFGLGLFYARLFIRMHGGSISIESELNVGTRVLISIPHTTSQSP
Specific function: Member of the two-component regulatory system rprX/rprY. May activate rprY by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=230, Percent_Identity=30.4347826086957, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI145693157, Length=253, Percent_Identity=25.6916996047431, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1788550, Length=126, Percent_Identity=37.3015873015873, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788713, Length=251, Percent_Identity=27.8884462151394, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786600, Length=271, Percent_Identity=24.3542435424354, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790299, Length=132, Percent_Identity=32.5757575757576, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=36.8421052631579, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=25.6521739130435, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082128, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=21.978021978022, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI87081816, Length=246, Percent_Identity=24.7967479674797, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790863, Length=137, Percent_Identity=32.1167883211679, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786783, Length=102, Percent_Identity=30.3921568627451, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=33.8983050847458, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788549, Length=245, Percent_Identity=24.8979591836735, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788905, Length=96, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1789808, Length=250, Percent_Identity=24.4, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=31.404958677686, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI1787229, Length=116, Percent_Identity=35.3448275862069, Blast_Score=62, Evalue=9e-11, Organism=Escherichia coli, GI1790346, Length=238, Percent_Identity=23.9495798319328, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42053; Mature: 42053
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLTPNPNQSLQLEIEKKTVLIVDDEAVIRDLCKRVLHDYDVIEAGDGAEALEIFHKGG CCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCC VDVILTDVMMPEMDGLELLKNLKEREPTVVVIIMTGFADKELILKALKADADDFITKPLN CCEEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHCCHH LLQLKSAVDKALVKKALKEEIANLKSVDSFKTLFLSMISHKFRTPITSISLFLQNLASGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC IDTRDEGAREHIGLVYDEACYLGNLVSELLAFSSFMNGNSDLHLEPCDLKDLIPSLISDS CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCC KEWLTKPGVAPQSDLEEVPELRLDREKIAFALQQVIDNAIKFSKDTGLVCVTMRNRAGSC HHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE QISVEDNGIGIPKEQLPKIFEKFYQVDADRTGQVRGFGLGLFYARLFIRMHGGSISIESE EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEECC LNVGTRVLISIPHTTSQSP CCCCEEEEEECCCCCCCCC >Mature Secondary Structure MLQLTPNPNQSLQLEIEKKTVLIVDDEAVIRDLCKRVLHDYDVIEAGDGAEALEIFHKGG CCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCC VDVILTDVMMPEMDGLELLKNLKEREPTVVVIIMTGFADKELILKALKADADDFITKPLN CCEEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHCCHH LLQLKSAVDKALVKKALKEEIANLKSVDSFKTLFLSMISHKFRTPITSISLFLQNLASGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC IDTRDEGAREHIGLVYDEACYLGNLVSELLAFSSFMNGNSDLHLEPCDLKDLIPSLISDS CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCC KEWLTKPGVAPQSDLEEVPELRLDREKIAFALQQVIDNAIKFSKDTGLVCVTMRNRAGSC HHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE QISVEDNGIGIPKEQLPKIFEKFYQVDADRTGQVRGFGLGLFYARLFIRMHGGSISIESE EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEECC LNVGTRVLISIPHTTSQSP CCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8469117 [H]