| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is argB
Identifier: 197119996
GI number: 197119996
Start: 4158604
End: 4159482
Strand: Direct
Name: argB
Synonym: Gbem_3635
Alternate gene names: 197119996
Gene position: 4158604-4159482 (Clockwise)
Preceding gene: 197119995
Following gene: 197119997
Centisome position: 90.11
GC content: 59.5
Gene sequence:
>879_bases ATGCAGCAACTCATAGAAAAGGCGAGCACACTCATGGAGGCGCTCCCTTATATCAGACGTTTTTCCGGCAAGACTATCGT CATCAAGTACGGCGGCCACGCGATGGCTGATGAGAAGCTCAGGAAGTCTTTCGCACTCGACGTCATCCTGCTCAAATACA TTGGCATCAATACCGTGGTAGTACACGGCGGCGGTCCGCAGATAAACGAGACACTGAAGCGCTACGGCATAGTGTCAGAG TTCGTGAAGGGGATGCGCGTCACCGATAAAGAGACGATGGGCGTCGTGGAGATGGTCCTGACCGGGCAGGTCAACCGCGA GGTGGTGGGATACATCAACCAGAACGGCGGCCGCGCGGCCGGACTCTCCGGCAAAGACGGCGACCTCTTGATCTGCGAGA AGCTGCTGCAGGAAGTAAAGAGCGAAGACGGCAGCACCGAGACGGTCGACATCGGTTTCGTCGGCGACGTAGTCGAGGTG AACCCCGCCATATTACAGGCATTGGAAAAGGGGGGCTTCATACCGGTCATAGCGCCGGTAGGAGTAGGTCGAGCCGGGGA GAGCTACAACATCAACGCCGACGTCGTGGCCGGCAAGGTCGCGGCCGCCCTTAACGCCGAAAAACTGATCCTTTTGACCG ACGTCTCGGGAGTGAAGAGCAAGGAGGGGGAACTCCTCTCCAGCATCCCGCTCGCCGATGTCCCCGCCCTCATCGACAAC GGCACCGTCACCGGCGGGATGATCCCCAAGGTCACCTGCTGCACCGACGCGCTTGCCGCCGGGGTCAAGAAGGCCCACAT CGTGGACGGCCGGATCGAGCACGCGATCCTGCTGGAGATCTTCACCAACGTCGGGATCGGGACGGAAATACAGGCTTAA
Upstream 100 bases:
>100_bases CATCGGCCTTTCAGTCAAACCCTCTTTGAAGTTGATTATTTCCCTCTATCTGCTATATTAACGTCTTTCAAAACGGCCAT AAACTATGAAAGAGGCGCCA
Downstream 100 bases:
>100_bases CTGCCAACTGCCGTTCAACGTTCAATGTTCGACAAAATTCGAGCCAGTAGAAGCCTCACCGTACGGCGCCGTCACAGTGA GAAGGACAACTAGCCCACGC
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MQQLIEKASTLMEALPYIRRFSGKTIVIKYGGHAMADEKLRKSFALDVILLKYIGINTVVVHGGGPQINETLKRYGIVSE FVKGMRVTDKETMGVVEMVLTGQVNREVVGYINQNGGRAAGLSGKDGDLLICEKLLQEVKSEDGSTETVDIGFVGDVVEV NPAILQALEKGGFIPVIAPVGVGRAGESYNINADVVAGKVAAALNAEKLILLTDVSGVKSKEGELLSSIPLADVPALIDN GTVTGGMIPKVTCCTDALAAGVKKAHIVDGRIEHAILLEIFTNVGIGTEIQA
Sequences:
>Translated_292_residues MQQLIEKASTLMEALPYIRRFSGKTIVIKYGGHAMADEKLRKSFALDVILLKYIGINTVVVHGGGPQINETLKRYGIVSE FVKGMRVTDKETMGVVEMVLTGQVNREVVGYINQNGGRAAGLSGKDGDLLICEKLLQEVKSEDGSTETVDIGFVGDVVEV NPAILQALEKGGFIPVIAPVGVGRAGESYNINADVVAGKVAAALNAEKLILLTDVSGVKSKEGELLSSIPLADVPALIDN GTVTGGMIPKVTCCTDALAAGVKKAHIVDGRIEHAILLEIFTNVGIGTEIQA >Mature_292_residues MQQLIEKASTLMEALPYIRRFSGKTIVIKYGGHAMADEKLRKSFALDVILLKYIGINTVVVHGGGPQINETLKRYGIVSE FVKGMRVTDKETMGVVEMVLTGQVNREVVGYINQNGGRAAGLSGKDGDLLICEKLLQEVKSEDGSTETVDIGFVGDVVEV NPAILQALEKGGFIPVIAPVGVGRAGESYNINADVVAGKVAAALNAEKLILLTDVSGVKSKEGELLSSIPLADVPALIDN GTVTGGMIPKVTCCTDALAAGVKKAHIVDGRIEHAILLEIFTNVGIGTEIQA
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI1789181, Length=297, Percent_Identity=28.956228956229, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI145693208, Length=269, Percent_Identity=30.4832713754647, Blast_Score=94, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320913, Length=297, Percent_Identity=26.9360269360269, Blast_Score=86, Evalue=5e-18,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ARGB_GEOBB (B5ED10)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002140423.1 - ProteinModelPortal: B5ED10 - SMR: B5ED10 - GeneID: 6780499 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_3635 - HOGENOM: HBG497643 - OMA: MDIVEMV - ProtClustDB: PRK00942 - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - InterPro: IPR001057 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - PRINTS: PR00474 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 30810; Mature: 30810
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: BINDING 86-86 BINDING 190-190
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLIEKASTLMEALPYIRRFSGKTIVIKYGGHAMADEKLRKSFALDVILLKYIGINTVV CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE VHGGGPQINETLKRYGIVSEFVKGMRVTDKETMGVVEMVLTGQVNREVVGYINQNGGRAA EECCCCCHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEC GLSGKDGDLLICEKLLQEVKSEDGSTETVDIGFVGDVVEVNPAILQALEKGGFIPVIAPV CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCHHHHHHHHHCCCEEEEECC GVGRAGESYNINADVVAGKVAAALNAEKLILLTDVSGVKSKEGELLSSIPLADVPALIDN CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHCCCCHHCCHHHCC GTVTGGMIPKVTCCTDALAAGVKKAHIVDGRIEHAILLEIFTNVGIGTEIQA CEECCCCCCCHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQQLIEKASTLMEALPYIRRFSGKTIVIKYGGHAMADEKLRKSFALDVILLKYIGINTVV CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE VHGGGPQINETLKRYGIVSEFVKGMRVTDKETMGVVEMVLTGQVNREVVGYINQNGGRAA EECCCCCHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEC GLSGKDGDLLICEKLLQEVKSEDGSTETVDIGFVGDVVEVNPAILQALEKGGFIPVIAPV CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCHHHHHHHHHCCCEEEEECC GVGRAGESYNINADVVAGKVAAALNAEKLILLTDVSGVKSKEGELLSSIPLADVPALIDN CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHCCCCHHCCHHHCC GTVTGGMIPKVTCCTDALAAGVKKAHIVDGRIEHAILLEIFTNVGIGTEIQA CEECCCCCCCHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA