Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119932

Identifier: 197119932

GI number: 197119932

Start: 4084774

End: 4085385

Strand: Direct

Name: 197119932

Synonym: Gbem_3571

Alternate gene names: NA

Gene position: 4084774-4085385 (Clockwise)

Preceding gene: 197119928

Following gene: 197119938

Centisome position: 88.51

GC content: 58.66

Gene sequence:

>612_bases
ATGGAACAGATCGATTACAAGAAGCGGCTCAAGCACCTTTTCGCCCCCCCCACCAAGCAGGTGGAAACGGTGGACGTGCC
GAAGATGAACTTCCTGATGGTGGACGGCGCCGGCGATCCGAACACCTCGCAGTCGTTCAAGGACGCGGTCGAAGCCCTCT
ACCCGGTGGCCTACACGCTGAAGTTCATGGTGAAAAAAGTTGAGTTGGCTGTGGACTATGGTGTGCTGCCCCTGGAAGGC
CTTTGGTGGTCCGACGACCTCTCCGCCTTCAGCACCGGCAACAAGGACGCCTGGAAATGGACCTTGATGATCATGCAGCC
GGAATTCATCACCGAATCCATGTTCACTGCCGCCATCGCCGAGGTGGCGCGCAAGAAGAAACCTGTTTCCTTGCCGCTGG
TGCGGTTCGAGCCCTTCCACGAGGGGAAGGCTGCCCAGATCCTGCACATCGGGCCTTTTTCCGAGGAGGGACCTACCATA
GAAAAGGTCCACTCCTTCATCGAGCAAAGCGGCAGCAGCAGGACCGGCAAGCACCACGAAATCTATCTGAGCGACCCGCG
CCGAACCGCGCCGGAAAAATGGAAGACGATCGTCCGGCAGCCGATGTCATGA

Upstream 100 bases:

>100_bases
TAATAAGCCCTTACCCGTAACTGCGTCTTATGCTATGGTGCGACGCGCACCGAGATCTGGCTGCCGCTGGCATAGATACC
CTCTTTCAAAGGAGAGCCCC

Downstream 100 bases:

>100_bases
CGCAGAGCGCAACGGCGAAGACGGCTGCGGACTTCATTGCCCACTGCCACCTGCCCCCCTGCTTCTGAATCTCCATCGTC
CGCCTTTAAAATACAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEQIDYKKRLKHLFAPPTKQVETVDVPKMNFLMVDGAGDPNTSQSFKDAVEALYPVAYTLKFMVKKVELAVDYGVLPLEG
LWWSDDLSAFSTGNKDAWKWTLMIMQPEFITESMFTAAIAEVARKKKPVSLPLVRFEPFHEGKAAQILHIGPFSEEGPTI
EKVHSFIEQSGSSRTGKHHEIYLSDPRRTAPEKWKTIVRQPMS

Sequences:

>Translated_203_residues
MEQIDYKKRLKHLFAPPTKQVETVDVPKMNFLMVDGAGDPNTSQSFKDAVEALYPVAYTLKFMVKKVELAVDYGVLPLEG
LWWSDDLSAFSTGNKDAWKWTLMIMQPEFITESMFTAAIAEVARKKKPVSLPLVRFEPFHEGKAAQILHIGPFSEEGPTI
EKVHSFIEQSGSSRTGKHHEIYLSDPRRTAPEKWKTIVRQPMS
>Mature_203_residues
MEQIDYKKRLKHLFAPPTKQVETVDVPKMNFLMVDGAGDPNTSQSFKDAVEALYPVAYTLKFMVKKVELAVDYGVLPLEG
LWWSDDLSAFSTGNKDAWKWTLMIMQPEFITESMFTAAIAEVARKKKPVSLPLVRFEPFHEGKAAQILHIGPFSEEGPTI
EKVHSFIEQSGSSRTGKHHEIYLSDPRRTAPEKWKTIVRQPMS

Specific function: Unknown

COG id: COG4832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23083; Mature: 23083

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIDYKKRLKHLFAPPTKQVETVDVPKMNFLMVDGAGDPNTSQSFKDAVEALYPVAYTL
CCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
KFMVKKVELAVDYGVLPLEGLWWSDDLSAFSTGNKDAWKWTLMIMQPEFITESMFTAAIA
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHH
EVARKKKPVSLPLVRFEPFHEGKAAQILHIGPFSEEGPTIEKVHSFIEQSGSSRTGKHHE
HHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEE
IYLSDPRRTAPEKWKTIVRQPMS
EEECCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MEQIDYKKRLKHLFAPPTKQVETVDVPKMNFLMVDGAGDPNTSQSFKDAVEALYPVAYTL
CCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
KFMVKKVELAVDYGVLPLEGLWWSDDLSAFSTGNKDAWKWTLMIMQPEFITESMFTAAIA
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHH
EVARKKKPVSLPLVRFEPFHEGKAAQILHIGPFSEEGPTIEKVHSFIEQSGSSRTGKHHE
HHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEE
IYLSDPRRTAPEKWKTIVRQPMS
EEECCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA