Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197119914
Identifier: 197119914
GI number: 197119914
Start: 4068465
End: 4069022
Strand: Direct
Name: 197119914
Synonym: Gbem_3553
Alternate gene names: NA
Gene position: 4068465-4069022 (Clockwise)
Preceding gene: 197119913
Following gene: 197119915
Centisome position: 88.15
GC content: 57.17
Gene sequence:
>558_bases ATGGGAATCTTCGACAAGATCAAAGAGCGGATCAACGACAGGCTGAGCGATCCGGCCTTCATGGAACTGGTCCAGGAGCA GAGCCTCAAGGACCTCCTGGTCCGGCGGGAGTTCCGCATCACGCAGGCCTACCTGCAGCGGGAGTTCCTGAACAAGTTGA TCGACGACGAGATTCAGGAGTTCAGCATCGTCCTCTTCGACGGGTACGGCGAGATCGCCGGGAAGATGAAAAAGCGGCTG CTACCCTTCGCCATACCTTTTTCCGCCACCTTCTCCATCCAGGGGATCGAATTCAGCAGCGCCAGGAAGAGCGTATTTCT GAAGCTGGACCATGTCGCTCCCGTCGACTTCGACTGGCTCACCAAGAAGGTGGTAGAGCGCATTCCCTTTCTCTCCGGCA CGGGGGATTTCATCGTGTGCGACCTGACGCGGGTGCCGCGACTGGCCGAGCTTTTCGCGCAGCGGGTAAAGGGGATCAGC ATCTGGGACTTTATAACCCTCAAGGAGCTTTGGCTTAGAAAGGGTGAAATCGTAGGAAGGGTGGGGGTGGTACTATGA
Upstream 100 bases:
>100_bases TGCAGCCGGAGGAGCGGGAGCGGGCACTGGAAGCCTACCGTAAAGGGGTTGCGGTCCACGCCGCCTCCGAATTCAACTAC AGCGCCGGCCTGGTTTAGAC
Downstream 100 bases:
>100_bases CCGATTATCTAGTTCGTGCGATTGCCAAATCGGGGAGCGTCAGGGCCCTTGCCTGTGTCACCACGGCAACCGTCGGCGCG ATATGCAAACGCCACGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MGIFDKIKERINDRLSDPAFMELVQEQSLKDLLVRREFRITQAYLQREFLNKLIDDEIQEFSIVLFDGYGEIAGKMKKRL LPFAIPFSATFSIQGIEFSSARKSVFLKLDHVAPVDFDWLTKKVVERIPFLSGTGDFIVCDLTRVPRLAELFAQRVKGIS IWDFITLKELWLRKGEIVGRVGVVL
Sequences:
>Translated_185_residues MGIFDKIKERINDRLSDPAFMELVQEQSLKDLLVRREFRITQAYLQREFLNKLIDDEIQEFSIVLFDGYGEIAGKMKKRL LPFAIPFSATFSIQGIEFSSARKSVFLKLDHVAPVDFDWLTKKVVERIPFLSGTGDFIVCDLTRVPRLAELFAQRVKGIS IWDFITLKELWLRKGEIVGRVGVVL >Mature_184_residues GIFDKIKERINDRLSDPAFMELVQEQSLKDLLVRREFRITQAYLQREFLNKLIDDEIQEFSIVLFDGYGEIAGKMKKRLL PFAIPFSATFSIQGIEFSSARKSVFLKLDHVAPVDFDWLTKKVVERIPFLSGTGDFIVCDLTRVPRLAELFAQRVKGISI WDFITLKELWLRKGEIVGRVGVVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21400; Mature: 21269
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFDKIKERINDRLSDPAFMELVQEQSLKDLLVRREFRITQAYLQREFLNKLIDDEIQE CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIVLFDGYGEIAGKMKKRLLPFAIPFSATFSIQGIEFSSARKSVFLKLDHVAPVDFDWL EEEEEECCCHHHHHHHHHHHCCEECCCCCEEEEECCCHHCHHHHEEEEECCCCCCCHHHH TKKVVERIPFLSGTGDFIVCDLTRVPRLAELFAQRVKGISIWDFITLKELWLRKGEIVGR HHHHHHHCCCCCCCCCEEEEECHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH VGVVL CCCCC >Mature Secondary Structure GIFDKIKERINDRLSDPAFMELVQEQSLKDLLVRREFRITQAYLQREFLNKLIDDEIQE CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIVLFDGYGEIAGKMKKRLLPFAIPFSATFSIQGIEFSSARKSVFLKLDHVAPVDFDWL EEEEEECCCHHHHHHHHHHHCCEECCCCCEEEEECCCHHCHHHHEEEEECCCCCCCHHHH TKKVVERIPFLSGTGDFIVCDLTRVPRLAELFAQRVKGISIWDFITLKELWLRKGEIVGR HHHHHHHCCCCCCCCCEEEEECHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH VGVVL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA