Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119912

Identifier: 197119912

GI number: 197119912

Start: 4065439

End: 4065939

Strand: Direct

Name: 197119912

Synonym: Gbem_3551

Alternate gene names: NA

Gene position: 4065439-4065939 (Clockwise)

Preceding gene: 308535378

Following gene: 197119913

Centisome position: 88.09

GC content: 60.88

Gene sequence:

>501_bases
ATGCGCGCTCTCGCCCTGCTGTCACTGATACTGGTACTCTCGTCTCCGTTATCCTTATCCGCCAAAGAGAGGGGTAAGCG
CACTGCCACCAGCGCAGCCCAAAGCGGCGTCGCTTCCAGCCAGGAAGTCCTGGGGGATTTCGAGAAGATCCTCGATCTTT
GGCGTGACGGCAGCTACGACGAGCTGTACAGGCGAACCACCGGGGGACGGGAAAGCAAGGAAACCTTCGCCAGGAAGCTC
TCCGCCGCCCCGCGCCGCCCCGCGTGCTGCTGGGAGAAAATGCAGGACGTTGAAGTCTCTTCGAAAGGAGAGGGAAAAGC
CGTGGTCCGCGCGCGCCTCGGCTTCGAGGGGAGCGTCCCCGGCACCCAGTTCGTCACCAAGTCGATCAAACTGCAGAAAG
AAGGGAGTGTCTGGGCCATCAGTCAGTCCGACCTCCTTTCCCTCGCCGACTACTCCAAAAAGCGCAAGCTGTATCGCTAC
CTCCCGGTCCAGCAGAAATGA

Upstream 100 bases:

>100_bases
GTTAGAGTTCAGCAGCCGATCTGTGGCTTCAGCAGCCGATCTGTGGCGCGAACCGCGGGTTGCGATATGATTAGCCGGTC
TTTTCCAGGAGGATCTTCCT

Downstream 100 bases:

>100_bases
CAGGCGCCCCCTCCCGCAGCTAGCCCGCCCCCCGCCCCCGCTGCCATCTCCATCTCGATTCAACACTTTATCTTTATCTT
TATCTCAATCTGCCTCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYDELYRRTTGGRESKETFARKL
SAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVPGTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRY
LPVQQK

Sequences:

>Translated_166_residues
MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYDELYRRTTGGRESKETFARKL
SAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVPGTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRY
LPVQQK
>Mature_166_residues
MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYDELYRRTTGGRESKETFARKL
SAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVPGTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRY
LPVQQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18389; Mature: 18389

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYD
CHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
ELYRRTTGGRESKETFARKLSAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVP
HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC
GTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRYLPVQQK
CHHHHHHHHHEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYD
CHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
ELYRRTTGGRESKETFARKLSAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVP
HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC
GTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRYLPVQQK
CHHHHHHHHHEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA