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The map label for this gene is 197119874

Identifier: 197119874

GI number: 197119874

Start: 4023721

End: 4024497

Strand: Direct

Name: 197119874

Synonym: Gbem_3512

Alternate gene names: NA

Gene position: 4023721-4024497 (Clockwise)

Preceding gene: 197119873

Following gene: 197119875

Centisome position: 87.19

GC content: 66.67

Gene sequence:

>777_bases
ATGAGAAAACAGCTGACACGCCGATACCCGGGGCCGCAGGGGATGTTCGCGCTCTCCTTCGTCTGCCACCTGGTCGTGTT
TCTGATCATAGCCAAGTGGCAACTCTCACCGGAATTACATCCGGACGACACCCCGGTCACCTACGTAGACATGGTCACCC
TCCCCGTCGCCTCGCCTCAGGCCGGCACCCCCGCGCCTGCGGCCGAGGCGGAGAAGGAAGCTGCCCCTCCCCCGCCTGCC
GCGCCTGCTGCACCGGCCATGGTGCAGCCCGCCAAACCGGCGAAGCCCGCGAAACCTGCGGCCAAGGCTCCGGCGGCGGA
GCCCAAGGGGAAGTCCGCGCCGGCGAACCCCGCGGCCCAGGCGCAGGAGTTCAACGAGCGGCTGGCGAAACTGGAGCGGG
TCGCCCAGGATAAACGGCAGGCCGAGGTCATGGAGCGGCTGAGGAAGAAGGGAAGCCAGCAGACCGGGATGCCCGGGGCC
AAGGGAACCGAGGCCGGGAGCGACTACCCCTCGTACCTCCAGTCCCGCCTCAAGGATGCACTCAAGGAAGTCATGGTCTC
GCAGACCAAGTCGCCGCAGGTGATCGCAACCATCACCGTGTCCGGCGACGGCAGGATCGCGGAATACCATGTGGAAAAGG
GATCAGGGGACCCGCTTTTTGACGATGCGGTCCATCGGGCCGTGACGCTGGCCGGCAAATCGCTGGTCCCACCGCCGGGC
GGCGCGCCGTTCAAGCGCATGTTCCGCTTCAGACCGGAAGGGGTCGGTATCAGATGA

Upstream 100 bases:

>100_bases
ACCAGGCGGTCCCCTACGGCGAGGTCGTGAAGGTGATGGCCCAGATCAAGGGGGCGGGAGTCGAGCGGCTCGGCATGGTA
ACGGAGTCCCCGCAGCGGCG

Downstream 100 bases:

>100_bases
GAATAATATTGCTGTTGGCCATGCTGCTCCTGGCGCCTCAAATGGCGCAGGCGGCAGAGGGATATATAGACGTAACGGCC
CCGGTGAGCCGCAAGCTCAA

Product: TonB-like periplasmic protein

Products: NA

Alternate protein names: NB-Like; NB-Dependent Receptor; NB-Like Periplasmic Protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRKQLTRRYPGPQGMFALSFVCHLVVFLIIAKWQLSPELHPDDTPVTYVDMVTLPVASPQAGTPAPAAEAEKEAAPPPPA
APAAPAMVQPAKPAKPAKPAAKAPAAEPKGKSAPANPAAQAQEFNERLAKLERVAQDKRQAEVMERLRKKGSQQTGMPGA
KGTEAGSDYPSYLQSRLKDALKEVMVSQTKSPQVIATITVSGDGRIAEYHVEKGSGDPLFDDAVHRAVTLAGKSLVPPPG
GAPFKRMFRFRPEGVGIR

Sequences:

>Translated_258_residues
MRKQLTRRYPGPQGMFALSFVCHLVVFLIIAKWQLSPELHPDDTPVTYVDMVTLPVASPQAGTPAPAAEAEKEAAPPPPA
APAAPAMVQPAKPAKPAKPAAKAPAAEPKGKSAPANPAAQAQEFNERLAKLERVAQDKRQAEVMERLRKKGSQQTGMPGA
KGTEAGSDYPSYLQSRLKDALKEVMVSQTKSPQVIATITVSGDGRIAEYHVEKGSGDPLFDDAVHRAVTLAGKSLVPPPG
GAPFKRMFRFRPEGVGIR
>Mature_258_residues
MRKQLTRRYPGPQGMFALSFVCHLVVFLIIAKWQLSPELHPDDTPVTYVDMVTLPVASPQAGTPAPAAEAEKEAAPPPPA
APAAPAMVQPAKPAKPAKPAAKAPAAEPKGKSAPANPAAQAQEFNERLAKLERVAQDKRQAEVMERLRKKGSQQTGMPGA
KGTEAGSDYPSYLQSRLKDALKEVMVSQTKSPQVIATITVSGDGRIAEYHVEKGSGDPLFDDAVHRAVTLAGKSLVPPPG
GAPFKRMFRFRPEGVGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27510; Mature: 27510

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLTRRYPGPQGMFALSFVCHLVVFLIIAKWQLSPELHPDDTPVTYVDMVTLPVASPQ
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCC
AGTPAPAAEAEKEAAPPPPAAPAAPAMVQPAKPAKPAKPAAKAPAAEPKGKSAPANPAAQ
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AQEFNERLAKLERVAQDKRQAEVMERLRKKGSQQTGMPGAKGTEAGSDYPSYLQSRLKDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LKEVMVSQTKSPQVIATITVSGDGRIAEYHVEKGSGDPLFDDAVHRAVTLAGKSLVPPPG
HHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
GAPFKRMFRFRPEGVGIR
CCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKQLTRRYPGPQGMFALSFVCHLVVFLIIAKWQLSPELHPDDTPVTYVDMVTLPVASPQ
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCC
AGTPAPAAEAEKEAAPPPPAAPAAPAMVQPAKPAKPAKPAAKAPAAEPKGKSAPANPAAQ
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AQEFNERLAKLERVAQDKRQAEVMERLRKKGSQQTGMPGAKGTEAGSDYPSYLQSRLKDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LKEVMVSQTKSPQVIATITVSGDGRIAEYHVEKGSGDPLFDDAVHRAVTLAGKSLVPPPG
HHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
GAPFKRMFRFRPEGVGIR
CCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA