Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197119838
Identifier: 197119838
GI number: 197119838
Start: 3991683
End: 3992057
Strand: Direct
Name: 197119838
Synonym: Gbem_3476
Alternate gene names: NA
Gene position: 3991683-3992057 (Clockwise)
Preceding gene: 197119825
Following gene: 197119843
Centisome position: 86.49
GC content: 51.47
Gene sequence:
>375_bases ATGCAGCGAGATATGGATCTATGTAGGAAGATACTGCAGGTTATCGAAGGTGGAAATGATCGGCCACACACAATAGGAGT GACCGATCTCGGCGAAGATGAGGCCTTCAATGTCACACAGGAGACCCTCAACTACCACGTGAAGCTTCTGATACAAGCGG ACCTGGTTAACTCAAGTGGGACCCTCGTGAGAGGGATTCCGGTGGTGCGGGGACTTACCTGGAAAGGTCATGATTTTGTG GAAAGCTCTCGAAATCAAGGTCTGTGGGAGAAAGCAAAGCAGACGGTAAAGGAAAAGACGGGGGGGCTGACTCTTGAACT GCTCTCAGCTGCCCTTGCCTCGGTAGCAAAGAAAGCACTCGGGATTGACGACTGA
Upstream 100 bases:
>100_bases CTCTTTAGGGGATTCGCTACAGTGTCAGGGCAACCTAGGAGAAAATAGACATGGCCAGTTCAATGTTGTACCCTCGGGCA GCTCAGATCAGGAGGCACAT
Downstream 100 bases:
>100_bases GCCCTGCAGCAGAGACTATGGTGAGGACAGACAAGCGGTGAGCATCTCAACGCTCCCCCTCTCACATCCTCTCGATTAAC GCCTGGATGTCCTCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MQRDMDLCRKILQVIEGGNDRPHTIGVTDLGEDEAFNVTQETLNYHVKLLIQADLVNSSGTLVRGIPVVRGLTWKGHDFV ESSRNQGLWEKAKQTVKEKTGGLTLELLSAALASVAKKALGIDD
Sequences:
>Translated_124_residues MQRDMDLCRKILQVIEGGNDRPHTIGVTDLGEDEAFNVTQETLNYHVKLLIQADLVNSSGTLVRGIPVVRGLTWKGHDFV ESSRNQGLWEKAKQTVKEKTGGLTLELLSAALASVAKKALGIDD >Mature_124_residues MQRDMDLCRKILQVIEGGNDRPHTIGVTDLGEDEAFNVTQETLNYHVKLLIQADLVNSSGTLVRGIPVVRGLTWKGHDFV ESSRNQGLWEKAKQTVKEKTGGLTLELLSAALASVAKKALGIDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13584; Mature: 13584
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRDMDLCRKILQVIEGGNDRPHTIGVTDLGEDEAFNVTQETLNYHVKLLIQADLVNSSG CCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCC TLVRGIPVVRGLTWKGHDFVESSRNQGLWEKAKQTVKEKTGGLTLELLSAALASVAKKAL CEEECCHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GIDD CCCC >Mature Secondary Structure MQRDMDLCRKILQVIEGGNDRPHTIGVTDLGEDEAFNVTQETLNYHVKLLIQADLVNSSG CCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCC TLVRGIPVVRGLTWKGHDFVESSRNQGLWEKAKQTVKEKTGGLTLELLSAALASVAKKAL CEEECCHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GIDD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA