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The map label for this gene is 197119843

Identifier: 197119843

GI number: 197119843

Start: 3994426

End: 3994806

Strand: Direct

Name: 197119843

Synonym: Gbem_3481

Alternate gene names: NA

Gene position: 3994426-3994806 (Clockwise)

Preceding gene: 197119838

Following gene: 308535371

Centisome position: 86.55

GC content: 60.63

Gene sequence:

>381_bases
ATGGTCAGGGAGCGTGGTGGCGGCGTGACGCCGGAGAGGGTAGTTGAGTTGCTGAAAAAAGAGGTGTCGGAAACGAGTAT
GCTCGCGGTGTCGCGGTCCACAGGGTTAGGTCTAGCAGCTATCGGGAGGTATTTGAAGGGGATCGGCGAACCGACTACGG
CGACCCTGCAGAAGCTTGCTGCGCACTTCGGGACCACCGTTCCCTATCTCCGCGGGGAAGCTTGGGCGATGAGAAACGGC
GGGATCGACTATAACCAGGCCGGGCCGGTTGCGGTCTGCGGAGAATGCGGCTCAGAATTGCGGGTTGAAGTCCAGGGTGC
CGGACCGCTGCGGGTCTGGTCTTGCGAACGATGTCAGCGTGGCACAACTTCCGAGGTTTAA

Upstream 100 bases:

>100_bases
CCCTTGGTCAGTGTTGACTTACCACTTATGGTAAGATACTAGTTACCACTGGTGGCAACTGTCAAGCACTAATTACCACA
AGTGGCAACAAAGGGTGAAA

Downstream 100 bases:

>100_bases
CCTTTGGTGACAGGCGGTCGCGCAATCACCTGTCAAATGCCGCGTCCTCCCCGCCCAAGCCATAATTAGAATATTGCATT
GTGCATTGTTGTGATATGGT

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Transcriptional Regulator

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MVRERGGGVTPERVVELLKKEVSETSMLAVSRSTGLGLAAIGRYLKGIGEPTTATLQKLAAHFGTTVPYLRGEAWAMRNG
GIDYNQAGPVAVCGECGSELRVEVQGAGPLRVWSCERCQRGTTSEV

Sequences:

>Translated_126_residues
MVRERGGGVTPERVVELLKKEVSETSMLAVSRSTGLGLAAIGRYLKGIGEPTTATLQKLAAHFGTTVPYLRGEAWAMRNG
GIDYNQAGPVAVCGECGSELRVEVQGAGPLRVWSCERCQRGTTSEV
>Mature_126_residues
MVRERGGGVTPERVVELLKKEVSETSMLAVSRSTGLGLAAIGRYLKGIGEPTTATLQKLAAHFGTTVPYLRGEAWAMRNG
GIDYNQAGPVAVCGECGSELRVEVQGAGPLRVWSCERCQRGTTSEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13395; Mature: 13395

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRERGGGVTPERVVELLKKEVSETSMLAVSRSTGLGLAAIGRYLKGIGEPTTATLQKLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHECCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
AHFGTTVPYLRGEAWAMRNGGIDYNQAGPVAVCGECGSELRVEVQGAGPLRVWSCERCQR
HHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEECCHHHCC
GTTSEV
CCCCCC
>Mature Secondary Structure
MVRERGGGVTPERVVELLKKEVSETSMLAVSRSTGLGLAAIGRYLKGIGEPTTATLQKLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHECCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
AHFGTTVPYLRGEAWAMRNGGIDYNQAGPVAVCGECGSELRVEVQGAGPLRVWSCERCQR
HHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEECCHHHCC
GTTSEV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA