| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is malQ-2 [H]
Identifier: 197117209
GI number: 197117209
Start: 967111
End: 968604
Strand: Reverse
Name: malQ-2 [H]
Synonym: Gbem_0817
Alternate gene names: 197117209
Gene position: 968604-967111 (Counterclockwise)
Preceding gene: 197117210
Following gene: 197117205
Centisome position: 20.99
GC content: 60.84
Gene sequence:
>1494_bases ATGAAAAAGCGCGGTAGCGGGATTCTCTGTCACATCACTTCCCTCCCCTCCCCATTCGGCATAGGAGACTTTGGCGCCGG CGCCTACGGGTTCGCCGATTTCCTGTGCGAGGCAAAACAGAGCTACTGGCAGATCCTGCCGCTCAACCCCACCAACAAGA GGTATTTCGACTCCCCCTTCAGCTCCCTCTCCTCCTGCGCCGGGAATACCGCCCTAATCAGCCCTGAGTTGCTGGCGGCG GAGGGGCTCCTGACGCAGCAGGAGGTGGAGGACCGTCCCCGCTTCCCGGAACACCGAGTGGATTACCAGGCCGCTTCGCG TTTCAAGCGGCAGCTTTTCCAGCGGGCGCACACCCGCTTCCAGAAGGGAGGCGTACCGGAGGACTACGCCAGGTTCTGCC GGGGCAACTCGATGTGGCTTGAGGACCATGCCCTCTTTACCGCGCTCAGCAATCATCTCGGCAATGCCCCGCTGACCGAA TGGCCGCAGGAACTCATCAACCGCAACAGCGAGAAGGTGCAGCTGCTGCGTGAAGAGTTCTGGGACGAGGTAGAGCTGGA GAAATTCCTGCAGTACCTCTTCTTCAAGCAGTGGCACCTGCTGAAGAACTACTGCAACGGCAAGGGGATCCGGATCATCG GCGACTTCCCCATGTTCATGAACTACGATGCCGTGGACATCTGGACCAATCCGGAACTGTTCAAGGTCGATGAGCGGAAA AAGCCTTACGTCCTCGCCGGGAGCCCCCCCGATGCCTTCAGCGCCGAAGGGCAGCTCTTCAACTGCGCGGTATACGACTG GGACGGGCTGAAGCGTAACGGTTTCAACTGGTGGATCAGGCGCTTTCACTACCTGTTCAGGCAGTACGACTTTGTGAGGA TCGACCATTTCCGCGGCCTGATCTCCTATTGGGAGGTCCCGGCAGGGGAGCAAAACGGGCTCAGGGGTAGCTGGCAGCAA ACCCCGACGCAGGAATTCTTCAACGCAATGCTGCAGCACTATCCCCTCTTCCCGGTGATCGCCGAGGACCTGGGGACCAT CGGCGCCGAGGTCAGGGAGACCATGGCACGGTACGCTATCCCCGGGATGAAGGTGCTCCTCTTGGGGTTCCAGAAGGAGG CGCATGAAAAGAGCTACCTGCCGCACCTCCACCCCCGCAACAGCGTGGCCTACACCGGCACCCACGACACCGCCACCGTC ACGGGGTGGTACCATGGCGCCGACGATAAGGAGCGGCAAGAACTCTTCCGCTATCTGGGGCGGCGGGCTGAGAACGGAGT GAACTGGGAACTGATCCGGCTGGCGCTGATGTCGGTAGCGCATACGGCGGTGATTCAGATGCAGGACGTCTTAGGGGCGG GCGAGGAATCGAGGATGAACAAACCAGGGAAAGCGGAAGGGAATTGGGAGTGGAGGGTCCCGCCAGGCGATCTTGGAGAG GTCGCTTCCCGTCTCGCCGAGATGACGATCTGCTACGGACGGGCGCAGGATTGA
Upstream 100 bases:
>100_bases GTGCTCTAGCCTCCGGTTAGGGAGCACCGTCAGTGACGCCGGAATCATCCACAAAGCCTCACCTGTTCCACGCAGGTGGG GCTTTTCTACGGGAGGATTT
Downstream 100 bases:
>100_bases TAATCGCCGGGCGCAAAAATGGGGCTTCGGGTTTTCCCGAAGCCCCATCGCTGTTCTTGCAGATGCTGGAGGCGCCGTTA TTTCTCGACCCCGAGCTTCT
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MKKRGSGILCHITSLPSPFGIGDFGAGAYGFADFLCEAKQSYWQILPLNPTNKRYFDSPFSSLSSCAGNTALISPELLAA EGLLTQQEVEDRPRFPEHRVDYQAASRFKRQLFQRAHTRFQKGGVPEDYARFCRGNSMWLEDHALFTALSNHLGNAPLTE WPQELINRNSEKVQLLREEFWDEVELEKFLQYLFFKQWHLLKNYCNGKGIRIIGDFPMFMNYDAVDIWTNPELFKVDERK KPYVLAGSPPDAFSAEGQLFNCAVYDWDGLKRNGFNWWIRRFHYLFRQYDFVRIDHFRGLISYWEVPAGEQNGLRGSWQQ TPTQEFFNAMLQHYPLFPVIAEDLGTIGAEVRETMARYAIPGMKVLLLGFQKEAHEKSYLPHLHPRNSVAYTGTHDTATV TGWYHGADDKERQELFRYLGRRAENGVNWELIRLALMSVAHTAVIQMQDVLGAGEESRMNKPGKAEGNWEWRVPPGDLGE VASRLAEMTICYGRAQD
Sequences:
>Translated_497_residues MKKRGSGILCHITSLPSPFGIGDFGAGAYGFADFLCEAKQSYWQILPLNPTNKRYFDSPFSSLSSCAGNTALISPELLAA EGLLTQQEVEDRPRFPEHRVDYQAASRFKRQLFQRAHTRFQKGGVPEDYARFCRGNSMWLEDHALFTALSNHLGNAPLTE WPQELINRNSEKVQLLREEFWDEVELEKFLQYLFFKQWHLLKNYCNGKGIRIIGDFPMFMNYDAVDIWTNPELFKVDERK KPYVLAGSPPDAFSAEGQLFNCAVYDWDGLKRNGFNWWIRRFHYLFRQYDFVRIDHFRGLISYWEVPAGEQNGLRGSWQQ TPTQEFFNAMLQHYPLFPVIAEDLGTIGAEVRETMARYAIPGMKVLLLGFQKEAHEKSYLPHLHPRNSVAYTGTHDTATV TGWYHGADDKERQELFRYLGRRAENGVNWELIRLALMSVAHTAVIQMQDVLGAGEESRMNKPGKAEGNWEWRVPPGDLGE VASRLAEMTICYGRAQD >Mature_497_residues MKKRGSGILCHITSLPSPFGIGDFGAGAYGFADFLCEAKQSYWQILPLNPTNKRYFDSPFSSLSSCAGNTALISPELLAA EGLLTQQEVEDRPRFPEHRVDYQAASRFKRQLFQRAHTRFQKGGVPEDYARFCRGNSMWLEDHALFTALSNHLGNAPLTE WPQELINRNSEKVQLLREEFWDEVELEKFLQYLFFKQWHLLKNYCNGKGIRIIGDFPMFMNYDAVDIWTNPELFKVDERK KPYVLAGSPPDAFSAEGQLFNCAVYDWDGLKRNGFNWWIRRFHYLFRQYDFVRIDHFRGLISYWEVPAGEQNGLRGSWQQ TPTQEFFNAMLQHYPLFPVIAEDLGTIGAEVRETMARYAIPGMKVLLLGFQKEAHEKSYLPHLHPRNSVAYTGTHDTATV TGWYHGADDKERQELFRYLGRRAENGVNWELIRLALMSVAHTAVIQMQDVLGAGEESRMNKPGKAEGNWEWRVPPGDLGE VASRLAEMTICYGRAQD
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=459, Percent_Identity=24.1830065359477, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 57252; Mature: 57252
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRGSGILCHITSLPSPFGIGDFGAGAYGFADFLCEAKQSYWQILPLNPTNKRYFDSPF CCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHH SSLSSCAGNTALISPELLAAEGLLTQQEVEDRPRFPEHRVDYQAASRFKRQLFQRAHTRF HHHHHHCCCCEECCCHHHHHHCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH QKGGVPEDYARFCRGNSMWLEDHALFTALSNHLGNAPLTEWPQELINRNSEKVQLLREEF HCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHH WDEVELEKFLQYLFFKQWHLLKNYCNGKGIRIIGDFPMFMNYDAVDIWTNPELFKVDERK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCEEEEECCCCEEEECCCC KPYVLAGSPPDAFSAEGQLFNCAVYDWDGLKRNGFNWWIRRFHYLFRQYDFVRIDHFRGL CCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHH ISYWEVPAGEQNGLRGSWQQTPTQEFFNAMLQHYPLFPVIAEDLGTIGAEVRETMARYAI HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC PGMKVLLLGFQKEAHEKSYLPHLHPRNSVAYTGTHDTATVTGWYHGADDKERQELFRYLG CCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHH RRAENGVNWELIRLALMSVAHTAVIQMQDVLGAGEESRMNKPGKAEGNWEWRVPPGDLGE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCHHH VASRLAEMTICYGRAQD HHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKRGSGILCHITSLPSPFGIGDFGAGAYGFADFLCEAKQSYWQILPLNPTNKRYFDSPF CCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHH SSLSSCAGNTALISPELLAAEGLLTQQEVEDRPRFPEHRVDYQAASRFKRQLFQRAHTRF HHHHHHCCCCEECCCHHHHHHCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH QKGGVPEDYARFCRGNSMWLEDHALFTALSNHLGNAPLTEWPQELINRNSEKVQLLREEF HCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHH WDEVELEKFLQYLFFKQWHLLKNYCNGKGIRIIGDFPMFMNYDAVDIWTNPELFKVDERK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCEEEEECCCCEEEECCCC KPYVLAGSPPDAFSAEGQLFNCAVYDWDGLKRNGFNWWIRRFHYLFRQYDFVRIDHFRGL CCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHH ISYWEVPAGEQNGLRGSWQQTPTQEFFNAMLQHYPLFPVIAEDLGTIGAEVRETMARYAI HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC PGMKVLLLGFQKEAHEKSYLPHLHPRNSVAYTGTHDTATVTGWYHGADDKERQELFRYLG CCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHH RRAENGVNWELIRLALMSVAHTAVIQMQDVLGAGEESRMNKPGKAEGNWEWRVPPGDLGE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCHHH VASRLAEMTICYGRAQD HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]