| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117205
Identifier: 197117205
GI number: 197117205
Start: 963841
End: 964176
Strand: Reverse
Name: 197117205
Synonym: Gbem_0813
Alternate gene names: NA
Gene position: 964176-963841 (Counterclockwise)
Preceding gene: 197117209
Following gene: 197117204
Centisome position: 20.89
GC content: 62.5
Gene sequence:
>336_bases TTGGCAGTTGTCCACATCGACAACCTGGCCCCCGGTATGGTTTTAAGCCGCAACGTCTGCGACCGCAGCGGCAGGATGCT GCTTCCGACCGGAGCGGAGCTTACCGAGAAGCATTTCTCGATCTTCAGGATGTGGGGGGTGCTCGAGGTCGAGATCGTAG GCGAAGGTATCGCCGAGGACGCCGAGGCGCCTCAGCACGAGGAGGTGGACCCCGAGCTTTTACGCCAGGCGCGAGCCGAG GTGGAGAGGCTGTTCGTACACAACGACCCGGAGCATCCCGCGGTGAAGGAGCTGCTACGTCTTTGCACCGAAAGGAGGGC CACCCGTGCACCGTAA
Upstream 100 bases:
>100_bases CCAGGGGCTAAAGAAACCGCAACAAGCACCGATACGCAAGTAGCAGCTAAATTCATGAGGACGCGGCCCACTGCAAGCAG GTGCAACAAAGGAGGTCTTC
Downstream 100 bases:
>100_bases GCCGCATTCTTCGGTGGAGCACATGGTGGAGGACGTCTCCACCATACATTCCCTTCCGATGTTTTACTCGCAACTATCGG AGGCGATCGACCACCCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MAVVHIDNLAPGMVLSRNVCDRSGRMLLPTGAELTEKHFSIFRMWGVLEVEIVGEGIAEDAEAPQHEEVDPELLRQARAE VERLFVHNDPEHPAVKELLRLCTERRATRAP
Sequences:
>Translated_111_residues MAVVHIDNLAPGMVLSRNVCDRSGRMLLPTGAELTEKHFSIFRMWGVLEVEIVGEGIAEDAEAPQHEEVDPELLRQARAE VERLFVHNDPEHPAVKELLRLCTERRATRAP >Mature_110_residues AVVHIDNLAPGMVLSRNVCDRSGRMLLPTGAELTEKHFSIFRMWGVLEVEIVGEGIAEDAEAPQHEEVDPELLRQARAEV ERLFVHNDPEHPAVKELLRLCTERRATRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12519; Mature: 12387
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVHIDNLAPGMVLSRNVCDRSGRMLLPTGAELTEKHFSIFRMWGVLEVEIVGEGIAED CEEEEECCCCCCHHHHCCHHCCCCCEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCC AEAPQHEEVDPELLRQARAEVERLFVHNDPEHPAVKELLRLCTERRATRAP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVVHIDNLAPGMVLSRNVCDRSGRMLLPTGAELTEKHFSIFRMWGVLEVEIVGEGIAED EEEEECCCCCCHHHHCCHHCCCCCEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCC AEAPQHEEVDPELLRQARAEVERLFVHNDPEHPAVKELLRLCTERRATRAP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA