| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117204
Identifier: 197117204
GI number: 197117204
Start: 962976
End: 963851
Strand: Reverse
Name: 197117204
Synonym: Gbem_0812
Alternate gene names: NA
Gene position: 963851-962976 (Counterclockwise)
Preceding gene: 197117205
Following gene: 197117203
Centisome position: 20.88
GC content: 61.76
Gene sequence:
>876_bases GTGCACCGTAAGCCGCATTCTTCGGTGGAGCACATGGTGGAGGACGTCTCCACCATACATTCCCTTCCGATGTTTTACTC GCAACTATCGGAGGCGATCGACCACCCCCGCAGTTCCATCGGGGACATCGCCAAGATCATCTCCGAGGACCAGGGGCTTA CCGCCAGGATCCTCAAGCTCGCCAACAGCCCCCTGTTCGGCTACTTCTCGAAGATCGACACTATCACCCAGGCCGTGACC ATCATCGGGGTGCTCCAGGTGCGCGACTTGGCGCTGGCCCTCTCAGTCATGGACGTCTTCAAGGGGATCCCCGAGGACCT GGTCAACATGGAGCAGTTCTGGAAGCACAGCATCGCCACCGGGCTCGCGGCGCGGATTCTTGCCACCAGCCAGCGCGAGG CGAACCTCGAGCGCTTCTTCGTCGCCGGCATCCTCCACGATATCGGCCGACTGGTGATGTACGTCCGGGTGCCGGGGATC TGCCTGGAGCTTTTGGAACAGTGCCGGGCGACGGACACCCTCTTGCACCGCGCGGAACGCGAGAAGTTCGGCTTCGACCA CGCCGACGTCGGGGGGGCTCTGCTGAAAAAATGGAAGATCCCCCCCCGGGTGGCCGAACCAGTGGGCGCCCATCACGACT GCCGCCTGGGCGATCAATACCCGCGCGAAAGCTCCATACTCCACATAGCCGACATCATCGCCCACGCGCTGCAGCTCGGC AACAGCGGCGAGATCTTCGTGCCCGAACTGGACAAGGGGGTGTGGGACCGGCTGCAGATCTCCTGCTACTTCCTTCCCAC ACTGGTGAAACAGGTGGACAGCACCTATGAACAGACCGTATCGGTACTGTTCGGGAGTGAAGATGGATCGCAATGA
Upstream 100 bases:
>100_bases CAGGCGCGAGCCGAGGTGGAGAGGCTGTTCGTACACAACGACCCGGAGCATCCCGCGGTGAAGGAGCTGCTACGTCTTTG CACCGAAAGGAGGGCCACCC
Downstream 100 bases:
>100_bases GAGCGCACAGACGCAGGTCCGTAAGCTTCAGGAGAGGGTGAACTTCCTCGAGGAAACCAACCTGAACTACCTGAAGACGC TCGACGTGCTCACCGCATGC
Product: metal-dependent phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MHRKPHSSVEHMVEDVSTIHSLPMFYSQLSEAIDHPRSSIGDIAKIISEDQGLTARILKLANSPLFGYFSKIDTITQAVT IIGVLQVRDLALALSVMDVFKGIPEDLVNMEQFWKHSIATGLAARILATSQREANLERFFVAGILHDIGRLVMYVRVPGI CLELLEQCRATDTLLHRAEREKFGFDHADVGGALLKKWKIPPRVAEPVGAHHDCRLGDQYPRESSILHIADIIAHALQLG NSGEIFVPELDKGVWDRLQISCYFLPTLVKQVDSTYEQTVSVLFGSEDGSQ
Sequences:
>Translated_291_residues MHRKPHSSVEHMVEDVSTIHSLPMFYSQLSEAIDHPRSSIGDIAKIISEDQGLTARILKLANSPLFGYFSKIDTITQAVT IIGVLQVRDLALALSVMDVFKGIPEDLVNMEQFWKHSIATGLAARILATSQREANLERFFVAGILHDIGRLVMYVRVPGI CLELLEQCRATDTLLHRAEREKFGFDHADVGGALLKKWKIPPRVAEPVGAHHDCRLGDQYPRESSILHIADIIAHALQLG NSGEIFVPELDKGVWDRLQISCYFLPTLVKQVDSTYEQTVSVLFGSEDGSQ >Mature_291_residues MHRKPHSSVEHMVEDVSTIHSLPMFYSQLSEAIDHPRSSIGDIAKIISEDQGLTARILKLANSPLFGYFSKIDTITQAVT IIGVLQVRDLALALSVMDVFKGIPEDLVNMEQFWKHSIATGLAARILATSQREANLERFFVAGILHDIGRLVMYVRVPGI CLELLEQCRATDTLLHRAEREKFGFDHADVGGALLKKWKIPPRVAEPVGAHHDCRLGDQYPRESSILHIADIIAHALQLG NSGEIFVPELDKGVWDRLQISCYFLPTLVKQVDSTYEQTVSVLFGSEDGSQ
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 32435; Mature: 32435
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKPHSSVEHMVEDVSTIHSLPMFYSQLSEAIDHPRSSIGDIAKIISEDQGLTARILKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH ANSPLFGYFSKIDTITQAVTIIGVLQVRDLALALSVMDVFKGIPEDLVNMEQFWKHSIAT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GLAARILATSQREANLERFFVAGILHDIGRLVMYVRVPGICLELLEQCRATDTLLHRAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKFGFDHADVGGALLKKWKIPPRVAEPVGAHHDCRLGDQYPRESSILHIADIIAHALQLG HHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC NSGEIFVPELDKGVWDRLQISCYFLPTLVKQVDSTYEQTVSVLFGSEDGSQ CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHRKPHSSVEHMVEDVSTIHSLPMFYSQLSEAIDHPRSSIGDIAKIISEDQGLTARILKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH ANSPLFGYFSKIDTITQAVTIIGVLQVRDLALALSVMDVFKGIPEDLVNMEQFWKHSIAT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GLAARILATSQREANLERFFVAGILHDIGRLVMYVRVPGICLELLEQCRATDTLLHRAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKFGFDHADVGGALLKKWKIPPRVAEPVGAHHDCRLGDQYPRESSILHIADIIAHALQLG HHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC NSGEIFVPELDKGVWDRLQISCYFLPTLVKQVDSTYEQTVSVLFGSEDGSQ CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]