Click here to switch to the map view.

The map label for this gene is yafE [C]

Identifier: 197117152

GI number: 197117152

Start: 891020

End: 891649

Strand: Direct

Name: yafE [C]

Synonym: Gbem_0757

Alternate gene names: 197117152

Gene position: 891020-891649 (Clockwise)

Preceding gene: 197117150

Following gene: 197117156

Centisome position: 19.31

GC content: 61.43

Gene sequence:

>630_bases
ATGCAGCAAGCCAATAAACGTGACTTCGACGCCGTTGCCAACAGTTGGGACCAGGAACCGCGCCGTGTGAAACTGGCCCA
GGACATCGTGAGCGCCATGCGCCGCGAGCTTCCCCTCGATGCCGGGATGGAGGTGCTCGATTATGGCTGCGGCAGCGGAT
TGGTCACCCTGGGGCTTCAGCCGCTGGTAGGGAAGATAACCGGTGCCGACAGCTCCAAGGGGATGCTCGAGGTTCTGCAG
GCTAAGCTGGATGAAGGGAAGATAAAAAACGTGACGGTGCAGCTGCTGGATCTGGAGCGTCAGACGCTGGAGGCTTCCTA
CGACCTCATCACCAGTGCCATGACGCTGCACCACGTGCAGGACGTCTCCGCCTTGATCGCCTCGCTTGCCCGGGCGCTGA
AGCCGGGGGGCTTTCTCGCGCTGGCCGACCTGGAGACGGAAGACGGCAGCTTTCATAGCGATTCTAAAGGCGTCCTGCAC
CACGGCTTCTCCCGCGAATTCCTGGCCGGGGAATTCTCCAAAAACGGCCTGCGGGAGGTGCGTGTAGTGACCGCCGCCGT
CATGGAAAAGAAGGGGGAGGACGGCGGTTCGCGTTCCTACCCCGTCATACTTTGTCTGGGGCGTAAGTAG

Upstream 100 bases:

>100_bases
ATAACCCGGGATGTATTGACATTCATATCTTTGAATATTACCATTGCCGCACCAAACGCGCCGCGTCGCGGCCCCACCCA
CCGCCCAAGGAGAAACTATC

Downstream 100 bases:

>100_bases
CATAGCTCCTCTGTCCCCAAATGAAGGCTCTCCCGAGATGGCACCTTCCCCCACCCCCTGACCCCCTCCCGCAAGTGGAG
GGGACCAAAATAAAAAGCCC

Product: type 11 SAM-dependent methyltransferase

Products: NA

Alternate protein names: Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; SAM-Dependent Methyltransferase; ArsR Family Transcriptional Regulator; UbiE/COQ5 Methyltransferase; SAM Dependent Methyltransferase; Transcriptional Regulator ArsR Family/Methyltransferase; Pedicted SAM-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; ArsR Family Methyltransferase Transcriptional Regulator; Biotin Synthesis Protein BioC; Transcriptional Regulator ArsR Family

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MQQANKRDFDAVANSWDQEPRRVKLAQDIVSAMRRELPLDAGMEVLDYGCGSGLVTLGLQPLVGKITGADSSKGMLEVLQ
AKLDEGKIKNVTVQLLDLERQTLEASYDLITSAMTLHHVQDVSALIASLARALKPGGFLALADLETEDGSFHSDSKGVLH
HGFSREFLAGEFSKNGLREVRVVTAAVMEKKGEDGGSRSYPVILCLGRK

Sequences:

>Translated_209_residues
MQQANKRDFDAVANSWDQEPRRVKLAQDIVSAMRRELPLDAGMEVLDYGCGSGLVTLGLQPLVGKITGADSSKGMLEVLQ
AKLDEGKIKNVTVQLLDLERQTLEASYDLITSAMTLHHVQDVSALIASLARALKPGGFLALADLETEDGSFHSDSKGVLH
HGFSREFLAGEFSKNGLREVRVVTAAVMEKKGEDGGSRSYPVILCLGRK
>Mature_209_residues
MQQANKRDFDAVANSWDQEPRRVKLAQDIVSAMRRELPLDAGMEVLDYGCGSGLVTLGLQPLVGKITGADSSKGMLEVLQ
AKLDEGKIKNVTVQLLDLERQTLEASYDLITSAMTLHHVQDVSALIASLARALKPGGFLALADLETEDGSFHSDSKGVLH
HGFSREFLAGEFSKNGLREVRVVTAAVMEKKGEDGGSRSYPVILCLGRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22652; Mature: 22652

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQANKRDFDAVANSWDQEPRRVKLAQDIVSAMRRELPLDAGMEVLDYGCGSGLVTLGLQ
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHCCH
PLVGKITGADSSKGMLEVLQAKLDEGKIKNVTVQLLDLERQTLEASYDLITSAMTLHHVQ
HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
DVSALIASLARALKPGGFLALADLETEDGSFHSDSKGVLHHGFSREFLAGEFSKNGLREV
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHCHHCCCHHHHH
RVVTAAVMEKKGEDGGSRSYPVILCLGRK
HHHHHHHHHHCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MQQANKRDFDAVANSWDQEPRRVKLAQDIVSAMRRELPLDAGMEVLDYGCGSGLVTLGLQ
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHCCH
PLVGKITGADSSKGMLEVLQAKLDEGKIKNVTVQLLDLERQTLEASYDLITSAMTLHHVQ
HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
DVSALIASLARALKPGGFLALADLETEDGSFHSDSKGVLHHGFSREFLAGEFSKNGLREV
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHCHHCCCHHHHH
RVVTAAVMEKKGEDGGSRSYPVILCLGRK
HHHHHHHHHHCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA