| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is dagK [H]
Identifier: 197117104
GI number: 197117104
Start: 841471
End: 842340
Strand: Direct
Name: dagK [H]
Synonym: Gbem_0709
Alternate gene names: 197117104
Gene position: 841471-842340 (Clockwise)
Preceding gene: 197117103
Following gene: 197117105
Centisome position: 18.23
GC content: 68.28
Gene sequence:
>870_bases TTGACCAGACGCTGCTTTCTCATCGTGAACCCCACCTCGGGAAGCTATTCCCAGAGAACCGTGGATCAGATCATGGCCGG CCTCAGGGAGAGGGGGCTCGCACCCGAGCTGATGCCGACGGGAAGCGCCGCCGACCCGGCGCTCTTCGCTGCACGCCTTT GCGCCCAACACTCCGATCCGCTGGTCATAGTCGCCGGCGGCGACGGCACGGTGAACGGCGTCCTGAACGGCCTGGTCCCC GGTAGGGCGACCCTCGGGGTGGTCCCCTTGGGGACCGCCAACGTCCTGGCGCGGGAGTTGGGTATCTCTTCCGTCGCCGA CGCCCTGGACCGCCTGGCCAGAGGGACGACCCGACCCATCTCCGTGGGCGAGATCGAGCGGGACGGGGAGAAGAGGCGCT TCCTCTTGATGGCGGGCGCCGGGATGGACGGTGCGGTGGTGCGCGGGGTGCGCCTCTCCGAGAAGCGGGTCATAGGAAAA GGGGCCTACCTCCTCTCGGCGCTCAGGGTGCTCCTTTCTTGGGACCGGTCGGAACTCCGGGTTACAGGCGGTGGGCGGAG CCTCTCCTGCCACGGCGTGATCGTCTGCAACGCCGCCAAGTACGGCGGCAATTTCGTGCTCGCCCCCGAGGCGGACCTCT TCTCCCCGGGGTTCCAGGTGCTCTGCATCGAGGGGGGGCGGCTCGCCTACCTGAAGCTCGGCCTCATGCTGCTATCCGGC AGGGGGGCGCCCCCCAGCTGCGTGACCTCGTTCGCCGCGACGGAACTGGAGCTCTCCGGCGACAAGGCGGTGCAACTGGA CGGCGACTATTTCTGCTGCACCCCGTTGCACATCAGGACGCTCCCGGAGCTGGTCCGCCTGGTGGTCTGA
Upstream 100 bases:
>100_bases TATACAGATTGGAAAGAAAAAGGTGCCTCACGAGTCCCCGCCCCCGGAGGGGGAGGGTTAGGGAGGGGGCCTTTCATTTC ATCCGGACGAGGAGTCCCGC
Downstream 100 bases:
>100_bases GGCGCCGCTGGCGGCCAAATTCCCCTGTTGACAAAGTAACGGCAATATCGGATTAATGTGGCATTCGCCCCCTGCCGGGG GGCGGTGCTTCCCGGCGGCT
Product: sphingosine/diacylglycerol kinase-like protein
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTRRCFLIVNPTSGSYSQRTVDQIMAGLRERGLAPELMPTGSAADPALFAARLCAQHSDPLVIVAGGDGTVNGVLNGLVP GRATLGVVPLGTANVLARELGISSVADALDRLARGTTRPISVGEIERDGEKRRFLLMAGAGMDGAVVRGVRLSEKRVIGK GAYLLSALRVLLSWDRSELRVTGGGRSLSCHGVIVCNAAKYGGNFVLAPEADLFSPGFQVLCIEGGRLAYLKLGLMLLSG RGAPPSCVTSFAATELELSGDKAVQLDGDYFCCTPLHIRTLPELVRLVV
Sequences:
>Translated_289_residues MTRRCFLIVNPTSGSYSQRTVDQIMAGLRERGLAPELMPTGSAADPALFAARLCAQHSDPLVIVAGGDGTVNGVLNGLVP GRATLGVVPLGTANVLARELGISSVADALDRLARGTTRPISVGEIERDGEKRRFLLMAGAGMDGAVVRGVRLSEKRVIGK GAYLLSALRVLLSWDRSELRVTGGGRSLSCHGVIVCNAAKYGGNFVLAPEADLFSPGFQVLCIEGGRLAYLKLGLMLLSG RGAPPSCVTSFAATELELSGDKAVQLDGDYFCCTPLHIRTLPELVRLVV >Mature_288_residues TRRCFLIVNPTSGSYSQRTVDQIMAGLRERGLAPELMPTGSAADPALFAARLCAQHSDPLVIVAGGDGTVNGVLNGLVPG RATLGVVPLGTANVLARELGISSVADALDRLARGTTRPISVGEIERDGEKRRFLLMAGAGMDGAVVRGVRLSEKRVIGKG AYLLSALRVLLSWDRSELRVTGGGRSLSCHGVIVCNAAKYGGNFVLAPEADLFSPGFQVLCIEGGRLAYLKLGLMLLSGR GAPPSCVTSFAATELELSGDKAVQLDGDYFCCTPLHIRTLPELVRLVV
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=270, Percent_Identity=26.6666666666667, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 30388; Mature: 30257
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRCFLIVNPTSGSYSQRTVDQIMAGLRERGLAPELMPTGSAADPALFAARLCAQHSDP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC LVIVAGGDGTVNGVLNGLVPGRATLGVVPLGTANVLARELGISSVADALDRLARGTTRPI EEEEECCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHHHHCCCCCCC SVGEIERDGEKRRFLLMAGAGMDGAVVRGVRLSEKRVIGKGAYLLSALRVLLSWDRSELR CCCCCCCCCCCEEEEEEECCCCCCHHEECEEECCCEEECCHHHHHHHHHHHHHCCCCEEE VTGGGRSLSCHGVIVCNAAKYGGNFVLAPEADLFSPGFQVLCIEGGRLAYLKLGLMLLSG EECCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEHEEEEHEEEC RGAPPSCVTSFAATELELSGDKAVQLDGDYFCCTPLHIRTLPELVRLVV CCCCHHHHHHHHHEEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHC >Mature Secondary Structure TRRCFLIVNPTSGSYSQRTVDQIMAGLRERGLAPELMPTGSAADPALFAARLCAQHSDP CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC LVIVAGGDGTVNGVLNGLVPGRATLGVVPLGTANVLARELGISSVADALDRLARGTTRPI EEEEECCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHHHHCCCCCCC SVGEIERDGEKRRFLLMAGAGMDGAVVRGVRLSEKRVIGKGAYLLSALRVLLSWDRSELR CCCCCCCCCCCEEEEEEECCCCCCHHEECEEECCCEEECCHHHHHHHHHHHHHCCCCEEE VTGGGRSLSCHGVIVCNAAKYGGNFVLAPEADLFSPGFQVLCIEGGRLAYLKLGLMLLSG EECCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEHEEEEHEEEC RGAPPSCVTSFAATELELSGDKAVQLDGDYFCCTPLHIRTLPELVRLVV CCCCHHHHHHHHHEEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]