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The map label for this gene is ycbZ [H]

Identifier: 197117103

GI number: 197117103

Start: 838835

End: 841294

Strand: Direct

Name: ycbZ [H]

Synonym: Gbem_0708

Alternate gene names: 197117103

Gene position: 838835-841294 (Clockwise)

Preceding gene: 197117102

Following gene: 197117104

Centisome position: 18.18

GC content: 63.41

Gene sequence:

>2460_bases
ATGTCCGAAACCGACTGCCGCGTCCCTGTAGAGAAGCTTCGCTGGGTGTGCGATCCCGCCCTCTTCAATTTCAAGACCAC
CGAAGACATCGCCGGGCTGGAGGGGAGCGTCGCCCAGCACCGCGCCACGGCCGCGATCGACTTCGGCCTGGGCATGCCCA
ACAACGGGTTCAACATCTACCTCGCCGGTGACGCCGGGACCGGAAGGACCTCCACCATCCGGCAGATGCTGCAGAAGTAC
GTAAAGGACACCTCCCCCCCCAGCGACTGGTGCTATGTCCACAACTTCCACTCCCCCGACGCCCCCTTGGCCTTAGCCCT
TCCCGCCGGCATGGGGAAGGAGCTTGCCGCCGACATGCGGGAACTCTTGGATTACATGCGCTCCGACATCCCGACGGCCC
TGGAGAGCAAGGAGTACGAGACCAACCGGGTCACCCTGATCGAGCAGTTCCAGGAGAAAAACGGCGACATCTTCTCCGCG
CTGGAAAAGGAGGCGGCGGAACGCGGTTTCGCCCTGCAGCGCACCGTCTCCGGTCTGGTGATCGTTCCCCAGAAGGAGGG
GCGCAACTTTACCCAGGAGGAATACGAGGCGCTGGAAAAAAACGAGCGTGAGCAACTGGACTCAGTCGGGCGCGCACTAA
CCGAAAGGCTCAACGACTGCCTGCGCCAGGTGCGCGAGAACGAGAAATTGCTGCGCGACGCCCTGTCGCAGCTGGACCGC
GAACTGGGGCTTTCCGCCGTCGGGCACCACCTGGACCCCCTCAAGGAAAAGTACGTCGGCTTCCAGAAGGTCCAGAAGTA
CCTGGACGACGTCCAGGAGGACCTCCTTTTGAACCTGGAGGACTTCAAGCCGCAGGCGGCGCCTCCCCAGATCCCGGGGC
TGAAGCTTCCCAAGCAGGAGCCGACCTTCGAGCGCTACGAGGTGAACGTCCTGGTGGAGAACAACCCGGAAAACGGCGCG
CCGATGGTGTTCGAATCCAACCCCACCTACACCAACCTCTTCGGGCGGATCGAGAACATCATGCAGATGGGAGGGATGGC
CAGCACCAACTTTACCCTGATCAAGCCGGGCGCCCTGCACCGCGCCAACGGCGGCTACCTCATCGTGGACGCGCGCGAGG
TGCTGATCAACCCGTTCGCCTGGGAGTCCTTGAAGCGCTGCATCAGGAACATGGAGATAAAGATCGAGGACGTCCTGGAG
CAGTACCGCTTCATGACGGTGGTCTCGCTCAAGCCCGAGCCGATACCGCTTAACGCCAAGATCATCATGATCGGGTCGCT
CTGGATCTACTACCTCCTCTTCCACATGGAGCCCGACTACCGGAAGTTCTTCAAGGTGAAGGCCGACTTCGACAACCGGA
TCAACCGCACCCCCGAGGTGATGCACGACTACGCCCTCTTCGTGGCGGCGCACTGCTGCAAGGAAGGGCTCCTTCCCTTC
GACGCGACCGGGGTCGCCGCGCTTTTGGAGCACGCCTCGCGCCTGGTGGAGGACCAGGAGCTGCTCTCCTCGCAGTTCAC
CGAACTCTCCGACCTGATCCGCGAGGCGAGCTACTGGGCCAAGCGCGATGGGGCCGAGGTGGTGGACCGCAGCTGGGTGA
AGCGGGCGGTGCACGAGAAGACCTTCCGCTCCAACCGAATCGAGGAGCGGATCCAGGAATACCTGGCCCAGGGGGTGATC
CTGTGCGACACCAAGGGGAGCGTGGTCGGCCAGATCAACGGCCTCTCCGTCATGACCCTCGGCGATTACGCCTTCGGCCG
CCCCTCCCGCCTCACCATACGCGTCTCGCAGGGGCGCGCCGGCATGGTCAACATCGAGCGCGAGGTGAAGCTTTCCGGAC
CGATCCACGACAAGGGGGTGCTGATCCTGACCGGCTACCTGGCAGGCAAGTTCGCCCAGGACCAGCCGCTCTCCTTCTCC
GCCCACATCTGCTTCGAGCAGTCCTACGAGGGGGTCGAGGGGGACAGCGCCTCCAGCGCCGAACTCTACGGCCTTCTCTC
CGCGCTTTCCGGGCTCCCCATTCGGCAGGGGATAGCGGTCACCGGGAGCGTCAACCAGCACGGCCAGATCCAGCCCATCG
GCGGGGTGAACTACAAGATCGAGGGGTTCTACAACGTCTGCAAGGCCAAGGGGCTCACCGGCGAGCAGGGAGTCCTCATT
CCCAAGATCAACGAGCACAACCTGATGCTGAGCGACGAGGTGGTGCAGGCGGTCCAGGAGGGGATGTTCCACATCTGGAG
CGTTCAGGAAGTGGACCAGGGGATCGAGATCCTGACCGGCGTGGCGGCGGGGAAGATGGGCGAGGACGGGAGCTACCCCG
AGGGGAGCGTCAACTTCCTGGTGCAGCAGCGGCTGAAGAAGATGTTCGACAACATGCGGCGGCTGGCGCAGCAGGATAAG
GAGCAGGCGAAGGAAGAGGGAGCTCTCCCCCTTCCCGAGCCCGGCCCGTTGAAGGATTAA

Upstream 100 bases:

>100_bases
CGTCGATGAGTTGAAAGAAATGGTCGCCATCCGTTTCCAACCGCTTTTGAACCTGCACCTGCCACGATAGCCCAATGAAA
GGTGGGCGAGGAGGCTCCTC

Downstream 100 bases:

>100_bases
GGGAGTAACGAGGACTTGAAAAGGGGAGGGGGATTTGCTACCTTCCCGCGAGGGCCGCACGCCGCGGCCCTTTTTTTATA
CAGATTGGAAAGAAAAAGGT

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 819; Mature: 818

Protein sequence:

>819_residues
MSETDCRVPVEKLRWVCDPALFNFKTTEDIAGLEGSVAQHRATAAIDFGLGMPNNGFNIYLAGDAGTGRTSTIRQMLQKY
VKDTSPPSDWCYVHNFHSPDAPLALALPAGMGKELAADMRELLDYMRSDIPTALESKEYETNRVTLIEQFQEKNGDIFSA
LEKEAAERGFALQRTVSGLVIVPQKEGRNFTQEEYEALEKNEREQLDSVGRALTERLNDCLRQVRENEKLLRDALSQLDR
ELGLSAVGHHLDPLKEKYVGFQKVQKYLDDVQEDLLLNLEDFKPQAAPPQIPGLKLPKQEPTFERYEVNVLVENNPENGA
PMVFESNPTYTNLFGRIENIMQMGGMASTNFTLIKPGALHRANGGYLIVDAREVLINPFAWESLKRCIRNMEIKIEDVLE
QYRFMTVVSLKPEPIPLNAKIIMIGSLWIYYLLFHMEPDYRKFFKVKADFDNRINRTPEVMHDYALFVAAHCCKEGLLPF
DATGVAALLEHASRLVEDQELLSSQFTELSDLIREASYWAKRDGAEVVDRSWVKRAVHEKTFRSNRIEERIQEYLAQGVI
LCDTKGSVVGQINGLSVMTLGDYAFGRPSRLTIRVSQGRAGMVNIEREVKLSGPIHDKGVLILTGYLAGKFAQDQPLSFS
AHICFEQSYEGVEGDSASSAELYGLLSALSGLPIRQGIAVTGSVNQHGQIQPIGGVNYKIEGFYNVCKAKGLTGEQGVLI
PKINEHNLMLSDEVVQAVQEGMFHIWSVQEVDQGIEILTGVAAGKMGEDGSYPEGSVNFLVQQRLKKMFDNMRRLAQQDK
EQAKEEGALPLPEPGPLKD

Sequences:

>Translated_819_residues
MSETDCRVPVEKLRWVCDPALFNFKTTEDIAGLEGSVAQHRATAAIDFGLGMPNNGFNIYLAGDAGTGRTSTIRQMLQKY
VKDTSPPSDWCYVHNFHSPDAPLALALPAGMGKELAADMRELLDYMRSDIPTALESKEYETNRVTLIEQFQEKNGDIFSA
LEKEAAERGFALQRTVSGLVIVPQKEGRNFTQEEYEALEKNEREQLDSVGRALTERLNDCLRQVRENEKLLRDALSQLDR
ELGLSAVGHHLDPLKEKYVGFQKVQKYLDDVQEDLLLNLEDFKPQAAPPQIPGLKLPKQEPTFERYEVNVLVENNPENGA
PMVFESNPTYTNLFGRIENIMQMGGMASTNFTLIKPGALHRANGGYLIVDAREVLINPFAWESLKRCIRNMEIKIEDVLE
QYRFMTVVSLKPEPIPLNAKIIMIGSLWIYYLLFHMEPDYRKFFKVKADFDNRINRTPEVMHDYALFVAAHCCKEGLLPF
DATGVAALLEHASRLVEDQELLSSQFTELSDLIREASYWAKRDGAEVVDRSWVKRAVHEKTFRSNRIEERIQEYLAQGVI
LCDTKGSVVGQINGLSVMTLGDYAFGRPSRLTIRVSQGRAGMVNIEREVKLSGPIHDKGVLILTGYLAGKFAQDQPLSFS
AHICFEQSYEGVEGDSASSAELYGLLSALSGLPIRQGIAVTGSVNQHGQIQPIGGVNYKIEGFYNVCKAKGLTGEQGVLI
PKINEHNLMLSDEVVQAVQEGMFHIWSVQEVDQGIEILTGVAAGKMGEDGSYPEGSVNFLVQQRLKKMFDNMRRLAQQDK
EQAKEEGALPLPEPGPLKD
>Mature_818_residues
SETDCRVPVEKLRWVCDPALFNFKTTEDIAGLEGSVAQHRATAAIDFGLGMPNNGFNIYLAGDAGTGRTSTIRQMLQKYV
KDTSPPSDWCYVHNFHSPDAPLALALPAGMGKELAADMRELLDYMRSDIPTALESKEYETNRVTLIEQFQEKNGDIFSAL
EKEAAERGFALQRTVSGLVIVPQKEGRNFTQEEYEALEKNEREQLDSVGRALTERLNDCLRQVRENEKLLRDALSQLDRE
LGLSAVGHHLDPLKEKYVGFQKVQKYLDDVQEDLLLNLEDFKPQAAPPQIPGLKLPKQEPTFERYEVNVLVENNPENGAP
MVFESNPTYTNLFGRIENIMQMGGMASTNFTLIKPGALHRANGGYLIVDAREVLINPFAWESLKRCIRNMEIKIEDVLEQ
YRFMTVVSLKPEPIPLNAKIIMIGSLWIYYLLFHMEPDYRKFFKVKADFDNRINRTPEVMHDYALFVAAHCCKEGLLPFD
ATGVAALLEHASRLVEDQELLSSQFTELSDLIREASYWAKRDGAEVVDRSWVKRAVHEKTFRSNRIEERIQEYLAQGVIL
CDTKGSVVGQINGLSVMTLGDYAFGRPSRLTIRVSQGRAGMVNIEREVKLSGPIHDKGVLILTGYLAGKFAQDQPLSFSA
HICFEQSYEGVEGDSASSAELYGLLSALSGLPIRQGIAVTGSVNQHGQIQPIGGVNYKIEGFYNVCKAKGLTGEQGVLIP
KINEHNLMLSDEVVQAVQEGMFHIWSVQEVDQGIEILTGVAAGKMGEDGSYPEGSVNFLVQQRLKKMFDNMRRLAQQDKE
QAKEEGALPLPEPGPLKD

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=425, Percent_Identity=33.6470588235294, Blast_Score=236, Evalue=5e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 91705; Mature: 91573

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETDCRVPVEKLRWVCDPALFNFKTTEDIAGLEGSVAQHRATAAIDFGLGMPNNGFNIY
CCCCCCCCCHHHHHHHHCHHHCCCCCCHHHCCCCCHHHHHHHHEEEEECCCCCCCCEEEE
LAGDAGTGRTSTIRQMLQKYVKDTSPPSDWCYVHNFHSPDAPLALALPAGMGKELAADMR
EECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHH
ELLDYMRSDIPTALESKEYETNRVTLIEQFQEKNGDIFSALEKEAAERGFALQRTVSGLV
HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCEE
IVPQKEGRNFTQEEYEALEKNEREQLDSVGRALTERLNDCLRQVRENEKLLRDALSQLDR
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGLSAVGHHLDPLKEKYVGFQKVQKYLDDVQEDLLLNLEDFKPQAAPPQIPGLKLPKQE
HHCHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
PTFERYEVNVLVENNPENGAPMVFESNPTYTNLFGRIENIMQMGGMASTNFTLIKPGALH
CCCEEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCE
RANGGYLIVDAREVLINPFAWESLKRCIRNMEIKIEDVLEQYRFMTVVSLKPEPIPLNAK
ECCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEHHHHHHHHHHEEEEECCCCCCCCCCE
IIMIGSLWIYYLLFHMEPDYRKFFKVKADFDNRINRTPEVMHDYALFVAAHCCKEGLLPF
EEEEHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DATGVAALLEHASRLVEDQELLSSQFTELSDLIREASYWAKRDGAEVVDRSWVKRAVHEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TFRSNRIEERIQEYLAQGVILCDTKGSVVGQINGLSVMTLGDYAFGRPSRLTIRVSQGRA
HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCEEEEEECCCCCCCCCEEEEEECCCCC
GMVNIEREVKLSGPIHDKGVLILTGYLAGKFAQDQPLSFSAHICFEQSYEGVEGDSASSA
CEEEEEEEEEECCCCCCCCEEEEEECHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHH
ELYGLLSALSGLPIRQGIAVTGSVNQHGQIQPIGGVNYKIEGFYNVCKAKGLTGEQGVLI
HHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHCCCCCCCCEEE
PKINEHNLMLSDEVVQAVQEGMFHIWSVQEVDQGIEILTGVAAGKMGEDGSYPEGSVNFL
EECCCCCEEECHHHHHHHHHCHHHEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VQQRLKKMFDNMRRLAQQDKEQAKEEGALPLPEPGPLKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETDCRVPVEKLRWVCDPALFNFKTTEDIAGLEGSVAQHRATAAIDFGLGMPNNGFNIY
CCCCCCCCHHHHHHHHCHHHCCCCCCHHHCCCCCHHHHHHHHEEEEECCCCCCCCEEEE
LAGDAGTGRTSTIRQMLQKYVKDTSPPSDWCYVHNFHSPDAPLALALPAGMGKELAADMR
EECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHH
ELLDYMRSDIPTALESKEYETNRVTLIEQFQEKNGDIFSALEKEAAERGFALQRTVSGLV
HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCEE
IVPQKEGRNFTQEEYEALEKNEREQLDSVGRALTERLNDCLRQVRENEKLLRDALSQLDR
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGLSAVGHHLDPLKEKYVGFQKVQKYLDDVQEDLLLNLEDFKPQAAPPQIPGLKLPKQE
HHCHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
PTFERYEVNVLVENNPENGAPMVFESNPTYTNLFGRIENIMQMGGMASTNFTLIKPGALH
CCCEEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCE
RANGGYLIVDAREVLINPFAWESLKRCIRNMEIKIEDVLEQYRFMTVVSLKPEPIPLNAK
ECCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEHHHHHHHHHHEEEEECCCCCCCCCCE
IIMIGSLWIYYLLFHMEPDYRKFFKVKADFDNRINRTPEVMHDYALFVAAHCCKEGLLPF
EEEEHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DATGVAALLEHASRLVEDQELLSSQFTELSDLIREASYWAKRDGAEVVDRSWVKRAVHEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TFRSNRIEERIQEYLAQGVILCDTKGSVVGQINGLSVMTLGDYAFGRPSRLTIRVSQGRA
HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCEEEEEECCCCCCCCCEEEEEECCCCC
GMVNIEREVKLSGPIHDKGVLILTGYLAGKFAQDQPLSFSAHICFEQSYEGVEGDSASSA
CEEEEEEEEEECCCCCCCCEEEEEECHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHH
ELYGLLSALSGLPIRQGIAVTGSVNQHGQIQPIGGVNYKIEGFYNVCKAKGLTGEQGVLI
HHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHCCCCCCCCEEE
PKINEHNLMLSDEVVQAVQEGMFHIWSVQEVDQGIEILTGVAAGKMGEDGSYPEGSVNFL
EECCCCCEEECHHHHHHHHHCHHHEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VQQRLKKMFDNMRRLAQQDKEQAKEEGALPLPEPGPLKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]