Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117072

Identifier: 197117072

GI number: 197117072

Start: 800274

End: 801353

Strand: Direct

Name: 197117072

Synonym: Gbem_0676

Alternate gene names: NA

Gene position: 800274-801353 (Clockwise)

Preceding gene: 197117071

Following gene: 197117073

Centisome position: 17.34

GC content: 60.83

Gene sequence:

>1080_bases
GTGAGATACAGGGAAACCGCATTTTTTCTTACGCTGTCGATTGCCGCCTGGGTCTGCCTGAGCGTGTTGGCGCAACCCGG
CGCATCGGCTTTTTCCTACGGTGAGGAGGCCGGCAAGAACGAGAGTTGCCTAGCCTGCCACGGCGATTCGGCGCAGGTGC
CCAAAGGCTTCTTCATCGACACCAAGCACTTCAACCAGACCACCCACGCCAGGATCGGGTGCGAGGCCTGTCACGCGGCG
GTCCCGGCCACCCATCCGGACGGCGCGAAGGTGGCAAGGGCTGGGTGCGGCGAGTGCCATGCCGACGTGGACCGGGAATA
CGCCACTGGGCTGCACGTCAAAAAGACCACCTGCAACGGTTGCCACAACCCGCACATGGTGCACAGCCCCAAGGAGATCT
CCGGGCAGGAGATCAACGCCATGTGCTCCAACTGCCACAACACGCTGGAAATGACGGCCAGGCACGGCGAGTGGCTCCCC
CAGTCGGAACTGCACCTGCGGATGCTGCCGTGCATAACCTGCCATACCGGATCGAAGGAGTATTTCATCAGCATGTACAT
AGTGAAGAGCAAGAACGGTTCGATGTTCGGCAAGCAGGAGGTGGCGGGGTACGACGAGTTGAAGCAGATGTCCGGGGGGA
AGGAGATCGTCTCGCTGATCGACAAAAACCGCGACAACTACGTCTCGCTTGAGGAGCTGCGCGTCTTCAACCGCAGCCAG
AATTCGCTGCGCCTGCACGGCATGATGACGCCGGTCTCCGTCTCGCACAAGTTCGAGATCCTCGACGACCGCCGCAACTG
CACCTTCTGCCACACCTCAGGCCCGGCCCTGATGCAGACAAGCTTCATCGCGGTGCCGGAAGCCGACGGCAGCTACAGCC
GCGTGCCGGTGGAAAAGGGAGCGGTCCTGGACGCACTTTACGGCACGCCCGACTTCTACATGATGGGGTCGACCAAGAAC
GGCGCCTTGAACAAGATCGGCCTCGCCATCATCTGCGGCGGACTGATCATGCCGGTAGGCCACGGCTTTGTGCGCTTCTT
GACCCGTAAAAACAGGAACACAAAGGAGCATAAGTCATGA

Upstream 100 bases:

>100_bases
GATGCGCAAGCTGGGGGCGGTGCGAAAACAGGAAGCGAAGGGCGAAAAGAAATAACCCAAAGCCGCTGGGGGAAGCGATC
CCCGGCAAAAGGAGGGGTAC

Downstream 100 bases:

>100_bases
GCGAAAATTCGAGCGAGAAAAAGAGGATCTACCTCCAGCCCTGGCCGGTCCGCATCTGGCACTGGATCAACGCCACCGGC
ATCATCGTCCTGATCGTAAC

Product: cytochrome c

Products: NA

Alternate protein names: Multiheme Cytochrome; Cytochrome C

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRYRETAFFLTLSIAAWVCLSVLAQPGASAFSYGEEAGKNESCLACHGDSAQVPKGFFIDTKHFNQTTHARIGCEACHAA
VPATHPDGAKVARAGCGECHADVDREYATGLHVKKTTCNGCHNPHMVHSPKEISGQEINAMCSNCHNTLEMTARHGEWLP
QSELHLRMLPCITCHTGSKEYFISMYIVKSKNGSMFGKQEVAGYDELKQMSGGKEIVSLIDKNRDNYVSLEELRVFNRSQ
NSLRLHGMMTPVSVSHKFEILDDRRNCTFCHTSGPALMQTSFIAVPEADGSYSRVPVEKGAVLDALYGTPDFYMMGSTKN
GALNKIGLAIICGGLIMPVGHGFVRFLTRKNRNTKEHKS

Sequences:

>Translated_359_residues
MRYRETAFFLTLSIAAWVCLSVLAQPGASAFSYGEEAGKNESCLACHGDSAQVPKGFFIDTKHFNQTTHARIGCEACHAA
VPATHPDGAKVARAGCGECHADVDREYATGLHVKKTTCNGCHNPHMVHSPKEISGQEINAMCSNCHNTLEMTARHGEWLP
QSELHLRMLPCITCHTGSKEYFISMYIVKSKNGSMFGKQEVAGYDELKQMSGGKEIVSLIDKNRDNYVSLEELRVFNRSQ
NSLRLHGMMTPVSVSHKFEILDDRRNCTFCHTSGPALMQTSFIAVPEADGSYSRVPVEKGAVLDALYGTPDFYMMGSTKN
GALNKIGLAIICGGLIMPVGHGFVRFLTRKNRNTKEHKS
>Mature_359_residues
MRYRETAFFLTLSIAAWVCLSVLAQPGASAFSYGEEAGKNESCLACHGDSAQVPKGFFIDTKHFNQTTHARIGCEACHAA
VPATHPDGAKVARAGCGECHADVDREYATGLHVKKTTCNGCHNPHMVHSPKEISGQEINAMCSNCHNTLEMTARHGEWLP
QSELHLRMLPCITCHTGSKEYFISMYIVKSKNGSMFGKQEVAGYDELKQMSGGKEIVSLIDKNRDNYVSLEELRVFNRSQ
NSLRLHGMMTPVSVSHKFEILDDRRNCTFCHTSGPALMQTSFIAVPEADGSYSRVPVEKGAVLDALYGTPDFYMMGSTKN
GALNKIGLAIICGGLIMPVGHGFVRFLTRKNRNTKEHKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39485; Mature: 39485

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRETAFFLTLSIAAWVCLSVLAQPGASAFSYGEEAGKNESCLACHGDSAQVPKGFFID
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHCCCCCCEEEECCCCCCCCCCEEEE
TKHFNQTTHARIGCEACHAAVPATHPDGAKVARAGCGECHADVDREYATGLHVKKTTCNG
CCCCCCCHHHHHCHHHHHHCCCCCCCCCHHHHHCCCCCHHHHCCHHHHCCCEEEECCCCC
CHNPHMVHSPKEISGQEINAMCSNCHNTLEMTARHGEWLPQSELHLRMLPCITCHTGSKE
CCCCCEECCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCE
YFISMYIVKSKNGSMFGKQEVAGYDELKQMSGGKEIVSLIDKNRDNYVSLEELRVFNRSQ
EEEEEEEEECCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHCCC
NSLRLHGMMTPVSVSHKFEILDDRRNCTFCHTSGPALMQTSFIAVPEADGSYSRVPVEKG
CCEEEEEEECCEECCEEEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCC
AVLDALYGTPDFYMMGSTKNGALNKIGLAIICGGLIMPVGHGFVRFLTRKNRNTKEHKS
CEEEHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRYRETAFFLTLSIAAWVCLSVLAQPGASAFSYGEEAGKNESCLACHGDSAQVPKGFFID
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHCCCCCCEEEECCCCCCCCCCEEEE
TKHFNQTTHARIGCEACHAAVPATHPDGAKVARAGCGECHADVDREYATGLHVKKTTCNG
CCCCCCCHHHHHCHHHHHHCCCCCCCCCHHHHHCCCCCHHHHCCHHHHCCCEEEECCCCC
CHNPHMVHSPKEISGQEINAMCSNCHNTLEMTARHGEWLPQSELHLRMLPCITCHTGSKE
CCCCCEECCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCE
YFISMYIVKSKNGSMFGKQEVAGYDELKQMSGGKEIVSLIDKNRDNYVSLEELRVFNRSQ
EEEEEEEEECCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHCCC
NSLRLHGMMTPVSVSHKFEILDDRRNCTFCHTSGPALMQTSFIAVPEADGSYSRVPVEKG
CCEEEEEEECCEECCEEEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCC
AVLDALYGTPDFYMMGSTKNGALNKIGLAIICGGLIMPVGHGFVRFLTRKNRNTKEHKS
CEEEHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA