| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117071
Identifier: 197117071
GI number: 197117071
Start: 799569
End: 800228
Strand: Direct
Name: 197117071
Synonym: Gbem_0675
Alternate gene names: NA
Gene position: 799569-800228 (Clockwise)
Preceding gene: 197117070
Following gene: 197117072
Centisome position: 17.32
GC content: 59.24
Gene sequence:
>660_bases ATGGACGAGCGGGGAATCATGATAGCGGACCGGGACGCCGACTTCCGCAGCCAAGTGGCTGAGCACTTCAGGAAGGCGGG GTACCGGGTGGAAACGACCGATTCGGCAGTCCATGTACTTTGCAACATTCTGGAGAAACAAACGCCGGTCCTGCTTTTGG GAAACGATTTCGATCAGAAGATCTCATCGGCAGACCTGATCCACCTTTTGAAGAAATGCAACCGCCACCTGCACGTCATC CTCGTCTCCGACGAGATGCCGCTGGCACAGGCCCGGCAGGTGCGCCAGGAAGGGATTTTCTATCACGCCTTGAAACCGGC CGATGCTACGGACAACGAGGAACTGGGACTTGCCGTGGAATGCGCCTTCAACAAGGAGCGCGTCAGATCAGCAGCAACGC CGGAGCCGGCCGTACAGGAAGGGGGATTGCTTTCCTGGCTGGCCCCCCTGGCGGTTCTTGTTTGCGGTACGAGCCTGGTA GCACTGGCCACGGCAGCCAGCATGGAGCAGGGAAGCAGCATGGCGATCTGGTTGTTCCTTGCTTTCTGTGCGCTGCTTCT CGTGACGCAGTTGCTGCCGGTTTTCCGGATCACCCTGCCGGCGCCGATGCGCAAGCTGGGGGCGGTGCGAAAACAGGAAG CGAAGGGCGAAAAGAAATAA
Upstream 100 bases:
>100_bases GCGCCATGATCAAGGGGATCTACGGCCTGGTCGGCAAGAAGGCGAAAGCGACGGTGGAAGAGAAGAAGTAGCGAAGCGGC GCTAGGGCGCGAGGTGAGTT
Downstream 100 bases:
>100_bases CCCAAAGCCGCTGGGGGAAGCGATCCCCGGCAAAAGGAGGGGTACGTGAGATACAGGGAAACCGCATTTTTTCTTACGCT GTCGATTGCCGCCTGGGTCT
Product: responser regulator
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator; Response Receiver
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDERGIMIADRDADFRSQVAEHFRKAGYRVETTDSAVHVLCNILEKQTPVLLLGNDFDQKISSADLIHLLKKCNRHLHVI LVSDEMPLAQARQVRQEGIFYHALKPADATDNEELGLAVECAFNKERVRSAATPEPAVQEGGLLSWLAPLAVLVCGTSLV ALATAASMEQGSSMAIWLFLAFCALLLVTQLLPVFRITLPAPMRKLGAVRKQEAKGEKK
Sequences:
>Translated_219_residues MDERGIMIADRDADFRSQVAEHFRKAGYRVETTDSAVHVLCNILEKQTPVLLLGNDFDQKISSADLIHLLKKCNRHLHVI LVSDEMPLAQARQVRQEGIFYHALKPADATDNEELGLAVECAFNKERVRSAATPEPAVQEGGLLSWLAPLAVLVCGTSLV ALATAASMEQGSSMAIWLFLAFCALLLVTQLLPVFRITLPAPMRKLGAVRKQEAKGEKK >Mature_219_residues MDERGIMIADRDADFRSQVAEHFRKAGYRVETTDSAVHVLCNILEKQTPVLLLGNDFDQKISSADLIHLLKKCNRHLHVI LVSDEMPLAQARQVRQEGIFYHALKPADATDNEELGLAVECAFNKERVRSAATPEPAVQEGGLLSWLAPLAVLVCGTSLV ALATAASMEQGSSMAIWLFLAFCALLLVTQLLPVFRITLPAPMRKLGAVRKQEAKGEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24101; Mature: 24101
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERGIMIADRDADFRSQVAEHFRKAGYRVETTDSAVHVLCNILEKQTPVLLLGNDFDQK CCCCCCEEECCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEECCCHHHH ISSADLIHLLKKCNRHLHVILVSDEMPLAQARQVRQEGIFYHALKPADATDNEELGLAVE HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE CAFNKERVRSAATPEPAVQEGGLLSWLAPLAVLVCGTSLVALATAASMEQGSSMAIWLFL ECCCHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AFCALLLVTQLLPVFRITLPAPMRKLGAVRKQEAKGEKK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDERGIMIADRDADFRSQVAEHFRKAGYRVETTDSAVHVLCNILEKQTPVLLLGNDFDQK CCCCCCEEECCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEECCCHHHH ISSADLIHLLKKCNRHLHVILVSDEMPLAQARQVRQEGIFYHALKPADATDNEELGLAVE HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE CAFNKERVRSAATPEPAVQEGGLLSWLAPLAVLVCGTSLVALATAASMEQGSSMAIWLFL ECCCHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AFCALLLVTQLLPVFRITLPAPMRKLGAVRKQEAKGEKK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA