Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is thiS-1
Identifier: 197117051
GI number: 197117051
Start: 776219
End: 776446
Strand: Reverse
Name: thiS-1
Synonym: Gbem_0654
Alternate gene names: NA
Gene position: 776446-776219 (Counterclockwise)
Preceding gene: 197117052
Following gene: 197117050
Centisome position: 16.82
GC content: 60.96
Gene sequence:
>228_bases GTGAACATCACCACCAACGGCGACGCCGTATCCATCGATCCCCTTACCGTTCAAGAGTACCTCCTCTCCCTGGGCATCGA CCCGCGCCGGGTCGCCGTCGAGCTGAACCTGGAGATCCTTCCCAAGGCACAGTACGAAACCACGGACCTCGCAGAGGGAG ACACCCTGGAGATAGTCCAGTTCGTGGGAGGAGGAAGCCTTCCGGCTTCCCTGCCCAAGGCAGGATAA
Upstream 100 bases:
>100_bases ATATTGATAGTTTACGGCATTCGTCCCCTCGCCCTGCGGACCCTGAGAAGGCCCCGGCGGGAGAGAACCGCTAACCGCCG CGCGCAACACCGGAGCAGCA
Downstream 100 bases:
>100_bases CGAGCGCCCGCCGCACCCGGGCCGGGGTCCCCCGGATCCTTCCGGGAAATAGATAATTGGAGAATCGAGATGACCCAGAC AAACGACAAGCTCGTTATTG
Product: thiamin biosynthesis sulfur carrier protein
Products: NA
Alternate protein names: Thiamin Biosynthesis Sulfur Carrier Protein; ThiS Thiamine-Biosynthesis
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MNITTNGDAVSIDPLTVQEYLLSLGIDPRRVAVELNLEILPKAQYETTDLAEGDTLEIVQFVGGGSLPASLPKAG
Sequences:
>Translated_75_residues MNITTNGDAVSIDPLTVQEYLLSLGIDPRRVAVELNLEILPKAQYETTDLAEGDTLEIVQFVGGGSLPASLPKAG >Mature_75_residues MNITTNGDAVSIDPLTVQEYLLSLGIDPRRVAVELNLEILPKAQYETTDLAEGDTLEIVQFVGGGSLPASLPKAG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7940; Mature: 7940
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITTNGDAVSIDPLTVQEYLLSLGIDPRRVAVELNLEILPKAQYETTDLAEGDTLEIVQ CCCCCCCCEEEECCCCHHHHHHHCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCEEEEE FVGGGSLPASLPKAG ECCCCCCCCCCCCCC >Mature Secondary Structure MNITTNGDAVSIDPLTVQEYLLSLGIDPRRVAVELNLEILPKAQYETTDLAEGDTLEIVQ CCCCCCCCEEEECCCCHHHHHHHCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCEEEEE FVGGGSLPASLPKAG ECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA