Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
---|---|
Accession | NC_011146 |
Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is cheR-4 [H]
Identifier: 197117023
GI number: 197117023
Start: 746292
End: 747125
Strand: Reverse
Name: cheR-4 [H]
Synonym: Gbem_0626
Alternate gene names: 197117023
Gene position: 747125-746292 (Counterclockwise)
Preceding gene: 197117024
Following gene: 197117022
Centisome position: 16.19
GC content: 63.43
Gene sequence:
>834_bases ATGATAGACGGTTTTAAAGGCGGCACCGAGCCGGACATCGCCCCGGAAACCTTCGACGTCATAGGCCGCATCCTGAAGGC ACGCTCCGGCTTCACCCTGGACGGTTACAAGGACAAGTGCGTCAAAAGGCGCATACACATAAGGGTCCGCGCCACCCAGT CCCCCTCCCCCGAGGCTTACGGCATGCTTCTGACCGAAAGCCCCGCCGAGCAGGAGCGCCTGCTGCGGGTACTCACCATC CACGTTTCCCATTTTTTCAGGAACCCCCCCGTCTTCGAAAGGCTCGCCGTCGATATCCTGCCGCAGCTGATAAGCGAGCG CAGGGAGCTCAACATCCTCAGTGTCGGCTGCGCAGGGGGAGAGGAGCCGTACACGGTCGCCTTGATCCTCAAGGAACGGT TTCCCCAGGCGCTGGAAGAGGGGCGCATCTCCCTTCGCGCCGTTGACGTCGACGTCTCTACGCTGGAGCACGCAAGAGAA GGGGTCTACCACCCGGACCGGCTGGCCGAGGTCCCGCCCGAACTTTTGTCGCGCTGGTTCACCCCGCAGGACGGGCGCTT TCGCCTGTCCCAGGAGATCCGCTCCCTGGTCAGCTTCAGCCAGGCGGACCTGAACCAGCCGCAGCAGTGGCCGCGCTGCG ACCTGGTGCTGTGCCGCAACGTGCTGATCTACTTCGAAAGAGAGCGCCAGGAGACCATCCTGAACGGCTTCGCCGACGCC CTGTTCCCTGGCGGCTGCCTGGTGCTGGGAAAGTCGGAGACGCTTTTTGGCGCCCCACGCAACCGTTTCAAGACCTTCTG TCCCGTGGAGCGCATCTACCGGGCCATCGCCTAA
Upstream 100 bases:
>100_bases CGTTTCCCATTTGTGCTGTTCTCCCCCAATTTTCAACAGAGGTTCAGATGTCCTCGAGCATGCGAGGCAGGCGGCAGTGC CCGGCAAAGGGCGACCCACG
Downstream 100 bases:
>100_bases CCAGCAGAATAAGGAGCTCGCCGCAATGTACATTCAAATCGGGTACAAGTTCATCCTGGGATTCCTGACCGTGGTCGCGG CCGTAGCCTTTGTCCCCTCG
Product: chemotaxis protein-glutamate methyltransferase CheR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MIDGFKGGTEPDIAPETFDVIGRILKARSGFTLDGYKDKCVKRRIHIRVRATQSPSPEAYGMLLTESPAEQERLLRVLTI HVSHFFRNPPVFERLAVDILPQLISERRELNILSVGCAGGEEPYTVALILKERFPQALEEGRISLRAVDVDVSTLEHARE GVYHPDRLAEVPPELLSRWFTPQDGRFRLSQEIRSLVSFSQADLNQPQQWPRCDLVLCRNVLIYFERERQETILNGFADA LFPGGCLVLGKSETLFGAPRNRFKTFCPVERIYRAIA
Sequences:
>Translated_277_residues MIDGFKGGTEPDIAPETFDVIGRILKARSGFTLDGYKDKCVKRRIHIRVRATQSPSPEAYGMLLTESPAEQERLLRVLTI HVSHFFRNPPVFERLAVDILPQLISERRELNILSVGCAGGEEPYTVALILKERFPQALEEGRISLRAVDVDVSTLEHARE GVYHPDRLAEVPPELLSRWFTPQDGRFRLSQEIRSLVSFSQADLNQPQQWPRCDLVLCRNVLIYFERERQETILNGFADA LFPGGCLVLGKSETLFGAPRNRFKTFCPVERIYRAIA >Mature_277_residues MIDGFKGGTEPDIAPETFDVIGRILKARSGFTLDGYKDKCVKRRIHIRVRATQSPSPEAYGMLLTESPAEQERLLRVLTI HVSHFFRNPPVFERLAVDILPQLISERRELNILSVGCAGGEEPYTVALILKERFPQALEEGRISLRAVDVDVSTLEHARE GVYHPDRLAEVPPELLSRWFTPQDGRFRLSQEIRSLVSFSQADLNQPQQWPRCDLVLCRNVLIYFERERQETILNGFADA LFPGGCLVLGKSETLFGAPRNRFKTFCPVERIYRAIA
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=253, Percent_Identity=30.8300395256917, Blast_Score=105, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 31522; Mature: 31522
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGFKGGTEPDIAPETFDVIGRILKARSGFTLDGYKDKCVKRRIHIRVRATQSPSPEAY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCE GMLLTESPAEQERLLRVLTIHVSHFFRNPPVFERLAVDILPQLISERRELNILSVGCAGG EEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC EEPYTVALILKERFPQALEEGRISLRAVDVDVSTLEHAREGVYHPDRLAEVPPELLSRWF CCCEEEEEHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCCCHHHHHCCHHHHHHCC TPQDGRFRLSQEIRSLVSFSQADLNQPQQWPRCDLVLCRNVLIYFERERQETILNGFADA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFPGGCLVLGKSETLFGAPRNRFKTFCPVERIYRAIA HCCCCEEEEECCCCEECCCHHHHHHCCCHHHHHHHHC >Mature Secondary Structure MIDGFKGGTEPDIAPETFDVIGRILKARSGFTLDGYKDKCVKRRIHIRVRATQSPSPEAY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCE GMLLTESPAEQERLLRVLTIHVSHFFRNPPVFERLAVDILPQLISERRELNILSVGCAGG EEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC EEPYTVALILKERFPQALEEGRISLRAVDVDVSTLEHAREGVYHPDRLAEVPPELLSRWF CCCEEEEEHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCCCHHHHHCCHHHHHHCC TPQDGRFRLSQEIRSLVSFSQADLNQPQQWPRCDLVLCRNVLIYFERERQETILNGFADA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFPGGCLVLGKSETLFGAPRNRFKTFCPVERIYRAIA HCCCCEEEEECCCCEECCCHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]