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The map label for this gene is mcp034 [C]

Identifier: 197117022

GI number: 197117022

Start: 744992

End: 746266

Strand: Reverse

Name: mcp034 [C]

Synonym: Gbem_0625

Alternate gene names: 197117022

Gene position: 746266-744992 (Counterclockwise)

Preceding gene: 197117023

Following gene: 197117021

Centisome position: 16.17

GC content: 62.43

Gene sequence:

>1275_bases
ATGTACATTCAAATCGGGTACAAGTTCATCCTGGGATTCCTGACCGTGGTCGCGGCCGTAGCCTTTGTCCCCTCGTGGGT
GGCTGCCCTGGACTACTCCCCCGAACTCACCAGCATACTCTCCTACGTAGTCGCGCTCACCATAGGGCTCATCCTCGGCT
CCTTCTTCTCCAAGAGCTTCACCAAGAACATCGCCCTCCTGCGCGGGGCCACCGAGTCGATCAGCGAGGGGGATCTCTCC
AGCGACCTCGTGTTCCCGGCAACCCGTTTCCCCGACGAGACCCACAGCATGGCCGTCTCCATTAACGCCATGCTGGTAAG
CCTCAGGACCCTGGTCCGCCAGATCCGGGAGACGGCCGAAAGGGTTTCGGAATCCACCAGGACGCTCAACTCCTCCGCGC
TTGAAATCAACGCCTCTACCGAGGAGGTGGCGCAAGCGATCGAGCAGATCTCCGGCGGCGCCGAGACCCAGGCCGAGATG
CTCGTCCGCAGCTCCAAGGTGATCCACGAGATGGCGATCTCCGTCGACCTGGTGGCGCGCCGGGCCAGGGAAACGGCCAA
AGCCGCCCGCGAGACCAGCATCACGGCGCAGCGCGGCGGCGAGCTCGCCAACGATTCGCTGGAGCGGATGAAGAGCTTCT
TCGACAGCGTCGAGCTGATTGGGATGCAGTTCATGGACCTGAACGGCAAGCTGCAGCAGGTAGGGAAGATCGCCGACTTC
ATCGTGGACATGGCGCGCCAGACCAACCTCCTCGCCTTGAACGCGTCCATCGAGGCGGCCCGCGCGGGAGAATACGGCAA
AGGTTTCGGCGTGGTTGCCGAAGAGGTAAGAAAGCTCGCCGACGGCAGCGCCAAGAGCGCCACAGATATCGTGGAGATGA
TCGACCTGGTCAAGATGGAAAGCCGCAAGCTGCAGGAGACCATCACCGACAGTTCGCGCGGCATCATCGCCGGAAAGAAG
AACGTGGACACCACCGCGGAGTCGTTCAAGGAGATCCTGGCCACCGTCATCGATACCGAGCGCAAGGCCAACTCCATCGC
GGACCTGTCGCAGATGCAGAACACCGGCGCGGAGAAGATGGTGAGCATGGTGGACGAGATAGCCAAAGTGGCCGAGGACA
ACGCCGCCTCCACCGAGGAGGTCTCCGCCGCGACCGAGCAGCAGCATTCCGCCATGCAGGAGATGGTGTTCCAGACCGTG
GAGCTCTCCAAGCTCGCCGAGGAATTGCTCCGCTCCGTCGAGAAGTTCCAGGTGCAAGGGGAGCCGGGTCAGTGA

Upstream 100 bases:

>100_bases
ACGCTTTTTGGCGCCCCACGCAACCGTTTCAAGACCTTCTGTCCCGTGGAGCGCATCTACCGGGCCATCGCCTAACCAGC
AGAATAAGGAGCTCGCCGCA

Downstream 100 bases:

>100_bases
TCCCGGAACGGCTGATCCTTTTCACGCTGGGGGGGGAGGAATTCGCCTGCAGCCTGCAGCAGATCGGCGAGGTGATGGAG
CCTCTGCAAAGCTACCCCTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MYIQIGYKFILGFLTVVAAVAFVPSWVAALDYSPELTSILSYVVALTIGLILGSFFSKSFTKNIALLRGATESISEGDLS
SDLVFPATRFPDETHSMAVSINAMLVSLRTLVRQIRETAERVSESTRTLNSSALEINASTEEVAQAIEQISGGAETQAEM
LVRSSKVIHEMAISVDLVARRARETAKAARETSITAQRGGELANDSLERMKSFFDSVELIGMQFMDLNGKLQQVGKIADF
IVDMARQTNLLALNASIEAARAGEYGKGFGVVAEEVRKLADGSAKSATDIVEMIDLVKMESRKLQETITDSSRGIIAGKK
NVDTTAESFKEILATVIDTERKANSIADLSQMQNTGAEKMVSMVDEIAKVAEDNAASTEEVSAATEQQHSAMQEMVFQTV
ELSKLAEELLRSVEKFQVQGEPGQ

Sequences:

>Translated_424_residues
MYIQIGYKFILGFLTVVAAVAFVPSWVAALDYSPELTSILSYVVALTIGLILGSFFSKSFTKNIALLRGATESISEGDLS
SDLVFPATRFPDETHSMAVSINAMLVSLRTLVRQIRETAERVSESTRTLNSSALEINASTEEVAQAIEQISGGAETQAEM
LVRSSKVIHEMAISVDLVARRARETAKAARETSITAQRGGELANDSLERMKSFFDSVELIGMQFMDLNGKLQQVGKIADF
IVDMARQTNLLALNASIEAARAGEYGKGFGVVAEEVRKLADGSAKSATDIVEMIDLVKMESRKLQETITDSSRGIIAGKK
NVDTTAESFKEILATVIDTERKANSIADLSQMQNTGAEKMVSMVDEIAKVAEDNAASTEEVSAATEQQHSAMQEMVFQTV
ELSKLAEELLRSVEKFQVQGEPGQ
>Mature_424_residues
MYIQIGYKFILGFLTVVAAVAFVPSWVAALDYSPELTSILSYVVALTIGLILGSFFSKSFTKNIALLRGATESISEGDLS
SDLVFPATRFPDETHSMAVSINAMLVSLRTLVRQIRETAERVSESTRTLNSSALEINASTEEVAQAIEQISGGAETQAEM
LVRSSKVIHEMAISVDLVARRARETAKAARETSITAQRGGELANDSLERMKSFFDSVELIGMQFMDLNGKLQQVGKIADF
IVDMARQTNLLALNASIEAARAGEYGKGFGVVAEEVRKLADGSAKSATDIVEMIDLVKMESRKLQETITDSSRGIIAGKK
NVDTTAESFKEILATVIDTERKANSIADLSQMQNTGAEKMVSMVDEIAKVAEDNAASTEEVSAATEQQHSAMQEMVFQTV
ELSKLAEELLRSVEKFQVQGEPGQ

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=287, Percent_Identity=30.3135888501742, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1787690, Length=361, Percent_Identity=29.3628808864266, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=30.3921568627451, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789453, Length=296, Percent_Identity=30.7432432432432, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI2367378, Length=268, Percent_Identity=29.8507462686567, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 46006; Mature: 46006

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIQIGYKFILGFLTVVAAVAFVPSWVAALDYSPELTSILSYVVALTIGLILGSFFSKSF
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TKNIALLRGATESISEGDLSSDLVFPATRFPDETHSMAVSINAMLVSLRTLVRQIRETAE
HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVSESTRTLNSSALEINASTEEVAQAIEQISGGAETQAEMLVRSSKVIHEMAISVDLVAR
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RARETAKAARETSITAQRGGELANDSLERMKSFFDSVELIGMQFMDLNGKLQQVGKIADF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IVDMARQTNLLALNASIEAARAGEYGKGFGVVAEEVRKLADGSAKSATDIVEMIDLVKME
HHHHHHCCCEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SRKLQETITDSSRGIIAGKKNVDTTAESFKEILATVIDTERKANSIADLSQMQNTGAEKM
HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VSMVDEIAKVAEDNAASTEEVSAATEQQHSAMQEMVFQTVELSKLAEELLRSVEKFQVQG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EPGQ
CCCC
>Mature Secondary Structure
MYIQIGYKFILGFLTVVAAVAFVPSWVAALDYSPELTSILSYVVALTIGLILGSFFSKSF
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TKNIALLRGATESISEGDLSSDLVFPATRFPDETHSMAVSINAMLVSLRTLVRQIRETAE
HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVSESTRTLNSSALEINASTEEVAQAIEQISGGAETQAEMLVRSSKVIHEMAISVDLVAR
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RARETAKAARETSITAQRGGELANDSLERMKSFFDSVELIGMQFMDLNGKLQQVGKIADF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IVDMARQTNLLALNASIEAARAGEYGKGFGVVAEEVRKLADGSAKSATDIVEMIDLVKME
HHHHHHCCCEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SRKLQETITDSSRGIIAGKKNVDTTAESFKEILATVIDTERKANSIADLSQMQNTGAEKM
HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VSMVDEIAKVAEDNAASTEEVSAATEQQHSAMQEMVFQTVELSKLAEELLRSVEKFQVQG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EPGQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA