| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheW-10
Identifier: 197117021
GI number: 197117021
Start: 744561
End: 744995
Strand: Reverse
Name: cheW-10
Synonym: Gbem_0624
Alternate gene names: NA
Gene position: 744995-744561 (Counterclockwise)
Preceding gene: 197117022
Following gene: 197117020
Centisome position: 16.14
GC content: 65.98
Gene sequence:
>435_bases GTGATCCCGGAACGGCTGATCCTTTTCACGCTGGGGGGGGAGGAATTCGCCTGCAGCCTGCAGCAGATCGGCGAGGTGAT GGAGCCTCTGCAAAGCTACCCCTTCGCCGGCGCCCCCGCGCATTACCTGGGGCTGATCAACTTCCACGGCAACCTCACCG CGCTCGTGGACCTGGCTCTTTATCTCGGGCTCAAAAGCCGCCCCATCCCCGGCAAGCTCCTGGTGCTCGACCCGAGGCTC GCCCATTTGGCGCTCAAGGTGGACGGGGTGAGCGCCATCATCGCCTCCGACCTCGTAACCGGCGAAGAGCCGGGGGAAGA CCCGCTTACCGAGGCGTACCTGGAGACCCCAAGTGGGCGCGTGCGGCTTTTGCAGCTGGAGGCCCTGATCGACGAGCTGG AGAACGGGCTCAAGCAGGCCCCCGCCCGCATCTAG
Upstream 100 bases:
>100_bases CCATGCAGGAGATGGTGTTCCAGACCGTGGAGCTCTCCAAGCTCGCCGAGGAATTGCTCCGCTCCGTCGAGAAGTTCCAG GTGCAAGGGGAGCCGGGTCA
Downstream 100 bases:
>100_bases TCGCAGTGGCTTAAGATTTGTAGCAGATCAGGAGGTAGCAATGGCCACTACGGTCATGATAGTCGACGACTCGCTGTTCA TGAGAAAGATGCTCCGTGAC
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: Chemotaxis Protein CheW
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MIPERLILFTLGGEEFACSLQQIGEVMEPLQSYPFAGAPAHYLGLINFHGNLTALVDLALYLGLKSRPIPGKLLVLDPRL AHLALKVDGVSAIIASDLVTGEEPGEDPLTEAYLETPSGRVRLLQLEALIDELENGLKQAPARI
Sequences:
>Translated_144_residues MIPERLILFTLGGEEFACSLQQIGEVMEPLQSYPFAGAPAHYLGLINFHGNLTALVDLALYLGLKSRPIPGKLLVLDPRL AHLALKVDGVSAIIASDLVTGEEPGEDPLTEAYLETPSGRVRLLQLEALIDELENGLKQAPARI >Mature_144_residues MIPERLILFTLGGEEFACSLQQIGEVMEPLQSYPFAGAPAHYLGLINFHGNLTALVDLALYLGLKSRPIPGKLLVLDPRL AHLALKVDGVSAIIASDLVTGEEPGEDPLTEAYLETPSGRVRLLQLEALIDELENGLKQAPARI
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15552; Mature: 15552
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPERLILFTLGGEEFACSLQQIGEVMEPLQSYPFAGAPAHYLGLINFHGNLTALVDLAL CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCHHHHHHHHH YLGLKSRPIPGKLLVLDPRLAHLALKVDGVSAIIASDLVTGEEPGEDPLTEAYLETPSGR HHCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC VRLLQLEALIDELENGLKQAPARI EEEEHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIPERLILFTLGGEEFACSLQQIGEVMEPLQSYPFAGAPAHYLGLINFHGNLTALVDLAL CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCHHHHHHHHH YLGLKSRPIPGKLLVLDPRLAHLALKVDGVSAIIASDLVTGEEPGEDPLTEAYLETPSGR HHCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC VRLLQLEALIDELENGLKQAPARI EEEEHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA