| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheY-7 [H]
Identifier: 197117020
GI number: 197117020
Start: 744155
End: 744520
Strand: Reverse
Name: cheY-7 [H]
Synonym: Gbem_0623
Alternate gene names: 197117020
Gene position: 744520-744155 (Counterclockwise)
Preceding gene: 197117021
Following gene: 197117019
Centisome position: 16.13
GC content: 60.66
Gene sequence:
>366_bases ATGGCCACTACGGTCATGATAGTCGACGACTCGCTGTTCATGAGAAAGATGCTCCGTGACATCCTAACCGAAGAGGGTTA CGAGATCACCGCCGAGGCGTCCGACGGCAATGAGGCAATTGAGAAGTACCAGGAGTGCCGCCCCGATCTCGTCACGCTGG ACATCGTGATGCCCAACAAGACCGGCATCGAGGCGCTGCAGATAATCATGGTGCTCGACCCGCAGGCGCGCGTGGTGATG TGCTCGGCCATCGGGCAGGAATCGATGACCGAGGCGGCCGCGAAGGCGGGGGCCAAGGCTTTCATCCTGAAGCCGTTCAA TCCGGAGCTTGTGGCGCGCACCCTTAGGGAAGTGGCCGAGGGATAG
Upstream 100 bases:
>100_bases CTGGAGGCCCTGATCGACGAGCTGGAGAACGGGCTCAAGCAGGCCCCCGCCCGCATCTAGTCGCAGTGGCTTAAGATTTG TAGCAGATCAGGAGGTAGCA
Downstream 100 bases:
>100_bases CGGATGGACATGTCGCAGTACAAAAGCCTCTTCCTCTCCGAGAGCAGGGAGTACCTGAAGACCATCTCCGACCAGGTGGT CGCCTTGGAGCAGGCTCCTG
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MATTVMIVDDSLFMRKMLRDILTEEGYEITAEASDGNEAIEKYQECRPDLVTLDIVMPNKTGIEALQIIMVLDPQARVVM CSAIGQESMTEAAAKAGAKAFILKPFNPELVARTLREVAEG
Sequences:
>Translated_121_residues MATTVMIVDDSLFMRKMLRDILTEEGYEITAEASDGNEAIEKYQECRPDLVTLDIVMPNKTGIEALQIIMVLDPQARVVM CSAIGQESMTEAAAKAGAKAFILKPFNPELVARTLREVAEG >Mature_120_residues ATTVMIVDDSLFMRKMLRDILTEEGYEITAEASDGNEAIEKYQECRPDLVTLDIVMPNKTGIEALQIIMVLDPQARVVMC SAIGQESMTEAAAKAGAKAFILKPFNPELVARTLREVAEG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=34.7457627118644, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI1788521, Length=118, Percent_Identity=32.2033898305085, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1788550, Length=103, Percent_Identity=31.0679611650485, Blast_Score=59, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13294; Mature: 13162
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTVMIVDDSLFMRKMLRDILTEEGYEITAEASDGNEAIEKYQECRPDLVTLDIVMPNK CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCC TGIEALQIIMVLDPQARVVMCSAIGQESMTEAAAKAGAKAFILKPFNPELVARTLREVAE CCHHHEEEEEEECCCCCEEEEHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC G C >Mature Secondary Structure ATTVMIVDDSLFMRKMLRDILTEEGYEITAEASDGNEAIEKYQECRPDLVTLDIVMPNK CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCC TGIEALQIIMVLDPQARVVMCSAIGQESMTEAAAKAGAKAFILKPFNPELVARTLREVAE CCHHHEEEEEEECCCCCEEEEHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9521117 [H]